Gene : Eucgr.J02520 E. grandis v2.0
Defline:  (1 of 3) PTHR11206:SF149 - MATE EFFLUX FAMILY PROTEIN 3, CHLOROPLASTIC Genomic Order:  2140
Name:  ? Eucgr.J02520 Secondary Identifier:  ? PAC:32035777
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02520 0.5kb upstream 0.5kb upstream 6304 true Chr10: 30350989-30357292 Eucalyptus grandis
Eucgr.J02520 0.5kb upstream 0.5kb upstream 500 false Chr10: 30350989-30351488 Eucalyptus grandis
Eucgr.J02520 0.5kb downstream 0.5kb downstream 6304 true Chr10: 30351489-30357792 Eucalyptus grandis
Eucgr.J02520 0.5kb downstream 0.5kb downstream 500 false Chr10: 30357293-30357792 Eucalyptus grandis
Eucgr.J02520 1.0kb upstream 1.0kb upstream 6804 true Chr10: 30350489-30357292 Eucalyptus grandis
Eucgr.J02520 1.0kb upstream 1.0kb upstream 1000 false Chr10: 30350489-30351488 Eucalyptus grandis
Eucgr.J02520 1.0kb downstream 1.0kb downstream 6804 true Chr10: 30351489-30358292 Eucalyptus grandis
Eucgr.J02520 1.0kb downstream 1.0kb downstream 1000 false Chr10: 30357293-30358292 Eucalyptus grandis
Eucgr.J02520 2.0kb upstream 2.0kb upstream 7804 true Chr10: 30349489-30357292 Eucalyptus grandis
Eucgr.J02520 2.0kb upstream 2.0kb upstream 2000 false Chr10: 30349489-30351488 Eucalyptus grandis
Eucgr.J02520 2.0kb downstream 2.0kb downstream 7804 true Chr10: 30351489-30359292 Eucalyptus grandis
Eucgr.J02520 2.0kb downstream 2.0kb downstream 2000 false Chr10: 30357293-30359292 Eucalyptus grandis
Eucgr.J02520 5.0kb upstream 5.0kb upstream 10804 true Chr10: 30346489-30357292 Eucalyptus grandis
Eucgr.J02520 5.0kb upstream 5.0kb upstream 5000 false Chr10: 30346489-30351488 Eucalyptus grandis
Eucgr.J02520 5.0kb downstream 5.0kb downstream 10804 true Chr10: 30351489-30362292 Eucalyptus grandis
Eucgr.J02520 5.0kb downstream 5.0kb downstream 5000 false Chr10: 30357293-30362292 Eucalyptus grandis
Eucgr.J02520 10.0kb upstream 10.0kb upstream 15804 true Chr10: 30341489-30357292 Eucalyptus grandis
Eucgr.J02520 10.0kb upstream 10.0kb upstream 10000 false Chr10: 30341489-30351488 Eucalyptus grandis
Eucgr.J02520 10.0kb downstream 10.0kb downstream 15804 true Chr10: 30351489-30367292 Eucalyptus grandis
Eucgr.J02520 10.0kb downstream 10.0kb downstream 10000 false Chr10: 30357293-30367292 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050870 5270 Rosid View MSA
123744854 5271 Pentapetalae View MSA
122788887 5272 Eudicot View MSA
122043189 5273 Angiosperm View MSA
121348626 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.61261 0.0 4.8625    
cufflinks 4.62162 0.0 14.078    
cufflinks 2.23435 0.0 6.24727    
cufflinks 2.04911 0.0 7.68535    
cufflinks 1.47719 0.0 4.37608    
cufflinks 30.5931 0.0 76.1186   High

0 Strain