Gene : Eucgr.J02500 E. grandis v2.0
Defline:  (1 of 2) PTHR11106//PTHR11106:SF58 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED Genomic Order:  2122
Name:  ? Eucgr.J02500 Secondary Identifier:  ? PAC:32035709
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02500 0.5kb upstream 0.5kb upstream 2281 true Chr10: 30250257-30252537 Eucalyptus grandis
Eucgr.J02500 0.5kb upstream 0.5kb upstream 500 false Chr10: 30250257-30250756 Eucalyptus grandis
Eucgr.J02500 0.5kb downstream 0.5kb downstream 2281 true Chr10: 30250757-30253037 Eucalyptus grandis
Eucgr.J02500 0.5kb downstream 0.5kb downstream 500 false Chr10: 30252538-30253037 Eucalyptus grandis
Eucgr.J02500 1.0kb upstream 1.0kb upstream 2781 true Chr10: 30249757-30252537 Eucalyptus grandis
Eucgr.J02500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 30249757-30250756 Eucalyptus grandis
Eucgr.J02500 1.0kb downstream 1.0kb downstream 2781 true Chr10: 30250757-30253537 Eucalyptus grandis
Eucgr.J02500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 30252538-30253537 Eucalyptus grandis
Eucgr.J02500 2.0kb upstream 2.0kb upstream 3781 true Chr10: 30248757-30252537 Eucalyptus grandis
Eucgr.J02500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 30248757-30250756 Eucalyptus grandis
Eucgr.J02500 2.0kb downstream 2.0kb downstream 3781 true Chr10: 30250757-30254537 Eucalyptus grandis
Eucgr.J02500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 30252538-30254537 Eucalyptus grandis
Eucgr.J02500 5.0kb upstream 5.0kb upstream 6781 true Chr10: 30245757-30252537 Eucalyptus grandis
Eucgr.J02500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 30245757-30250756 Eucalyptus grandis
Eucgr.J02500 5.0kb downstream 5.0kb downstream 6781 true Chr10: 30250757-30257537 Eucalyptus grandis
Eucgr.J02500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 30252538-30257537 Eucalyptus grandis
Eucgr.J02500 10.0kb upstream 10.0kb upstream 11781 true Chr10: 30240757-30252537 Eucalyptus grandis
Eucgr.J02500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 30240757-30250756 Eucalyptus grandis
Eucgr.J02500 10.0kb downstream 10.0kb downstream 11781 true Chr10: 30250757-30262537 Eucalyptus grandis
Eucgr.J02500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 30252538-30262537 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071837 5270 Rosid View MSA
123749107 5271 Pentapetalae View MSA
122786928 5272 Eudicot View MSA
122044832 5273 Angiosperm View MSA
121349496 5274 Embryophyte View MSA
123425593 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.52341 0.0 21.2435   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.93982 0.0 13.1013    
cufflinks 0.834429 0.0 2.71387   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.17957 0.0 6.16766    

0 Strain