Gene : Eucgr.J02477 E. grandis v2.0
Defline:  (1 of 503) PF01535 - PPR repeat (PPR) Genomic Order:  2102
Name:  ? Eucgr.J02477 Secondary Identifier:  ? PAC:32033398
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02477 0.5kb upstream 0.5kb upstream 2163 true Chr10: 30116162-30118324 Eucalyptus grandis
Eucgr.J02477 0.5kb upstream 0.5kb upstream 500 false Chr10: 30117825-30118324 Eucalyptus grandis
Eucgr.J02477 0.5kb downstream 0.5kb downstream 2163 true Chr10: 30115662-30117824 Eucalyptus grandis
Eucgr.J02477 0.5kb downstream 0.5kb downstream 500 false Chr10: 30115662-30116161 Eucalyptus grandis
Eucgr.J02477 1.0kb upstream 1.0kb upstream 2663 true Chr10: 30116162-30118824 Eucalyptus grandis
Eucgr.J02477 1.0kb upstream 1.0kb upstream 1000 false Chr10: 30117825-30118824 Eucalyptus grandis
Eucgr.J02477 1.0kb downstream 1.0kb downstream 2663 true Chr10: 30115162-30117824 Eucalyptus grandis
Eucgr.J02477 1.0kb downstream 1.0kb downstream 1000 false Chr10: 30115162-30116161 Eucalyptus grandis
Eucgr.J02477 2.0kb upstream 2.0kb upstream 3663 true Chr10: 30116162-30119824 Eucalyptus grandis
Eucgr.J02477 2.0kb upstream 2.0kb upstream 2000 false Chr10: 30117825-30119824 Eucalyptus grandis
Eucgr.J02477 2.0kb downstream 2.0kb downstream 3663 true Chr10: 30114162-30117824 Eucalyptus grandis
Eucgr.J02477 2.0kb downstream 2.0kb downstream 2000 false Chr10: 30114162-30116161 Eucalyptus grandis
Eucgr.J02477 5.0kb upstream 5.0kb upstream 6663 true Chr10: 30116162-30122824 Eucalyptus grandis
Eucgr.J02477 5.0kb upstream 5.0kb upstream 5000 false Chr10: 30117825-30122824 Eucalyptus grandis
Eucgr.J02477 5.0kb downstream 5.0kb downstream 6663 true Chr10: 30111162-30117824 Eucalyptus grandis
Eucgr.J02477 5.0kb downstream 5.0kb downstream 5000 false Chr10: 30111162-30116161 Eucalyptus grandis
Eucgr.J02477 10.0kb upstream 10.0kb upstream 11663 true Chr10: 30116162-30127824 Eucalyptus grandis
Eucgr.J02477 10.0kb upstream 10.0kb upstream 10000 false Chr10: 30117825-30127824 Eucalyptus grandis
Eucgr.J02477 10.0kb downstream 10.0kb downstream 11663 true Chr10: 30106162-30117824 Eucalyptus grandis
Eucgr.J02477 10.0kb downstream 10.0kb downstream 10000 false Chr10: 30106162-30116161 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051517 5270 Rosid View MSA
123741798 5271 Pentapetalae View MSA
122789514 5272 Eudicot View MSA
122049493 5273 Angiosperm View MSA
121311435 5274 Embryophyte View MSA
123348731 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.786303 0.0 2.29462    
cufflinks 0.111949 0.0 0.41618 Low  
cufflinks 0.332907 0.0 1.07016 Low  
cufflinks 0.0433287 0.0 0.207312 Low Low
cufflinks 0.576834 0.0 1.73604 Low  
cufflinks 0.732957 0.0 2.16705 Low  

0 Strain