Gene : Eucgr.J02388 E. grandis v2.0
Defline:  (1 of 1) PTHR34284:SF1 - FG-GAP REPEAT-CONTAINING PROTEIN Genomic Order:  2020
Name:  ? Eucgr.J02388 Secondary Identifier:  ? PAC:32032780
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02388 0.5kb upstream 0.5kb upstream 9833 true Chr10: 28975341-28985173 Eucalyptus grandis
Eucgr.J02388 0.5kb upstream 0.5kb upstream 500 false Chr10: 28975341-28975840 Eucalyptus grandis
Eucgr.J02388 0.5kb downstream 0.5kb downstream 9833 true Chr10: 28975841-28985673 Eucalyptus grandis
Eucgr.J02388 0.5kb downstream 0.5kb downstream 500 false Chr10: 28985174-28985673 Eucalyptus grandis
Eucgr.J02388 1.0kb upstream 1.0kb upstream 10333 true Chr10: 28974841-28985173 Eucalyptus grandis
Eucgr.J02388 1.0kb upstream 1.0kb upstream 1000 false Chr10: 28974841-28975840 Eucalyptus grandis
Eucgr.J02388 1.0kb downstream 1.0kb downstream 10333 true Chr10: 28975841-28986173 Eucalyptus grandis
Eucgr.J02388 1.0kb downstream 1.0kb downstream 1000 false Chr10: 28985174-28986173 Eucalyptus grandis
Eucgr.J02388 2.0kb upstream 2.0kb upstream 11333 true Chr10: 28973841-28985173 Eucalyptus grandis
Eucgr.J02388 2.0kb upstream 2.0kb upstream 2000 false Chr10: 28973841-28975840 Eucalyptus grandis
Eucgr.J02388 2.0kb downstream 2.0kb downstream 11333 true Chr10: 28975841-28987173 Eucalyptus grandis
Eucgr.J02388 2.0kb downstream 2.0kb downstream 2000 false Chr10: 28985174-28987173 Eucalyptus grandis
Eucgr.J02388 5.0kb upstream 5.0kb upstream 14333 true Chr10: 28970841-28985173 Eucalyptus grandis
Eucgr.J02388 5.0kb upstream 5.0kb upstream 5000 false Chr10: 28970841-28975840 Eucalyptus grandis
Eucgr.J02388 5.0kb downstream 5.0kb downstream 14333 true Chr10: 28975841-28990173 Eucalyptus grandis
Eucgr.J02388 5.0kb downstream 5.0kb downstream 5000 false Chr10: 28985174-28990173 Eucalyptus grandis
Eucgr.J02388 10.0kb upstream 10.0kb upstream 19333 true Chr10: 28965841-28985173 Eucalyptus grandis
Eucgr.J02388 10.0kb upstream 10.0kb upstream 10000 false Chr10: 28965841-28975840 Eucalyptus grandis
Eucgr.J02388 10.0kb downstream 10.0kb downstream 19333 true Chr10: 28975841-28995173 Eucalyptus grandis
Eucgr.J02388 10.0kb downstream 10.0kb downstream 10000 false Chr10: 28985174-28995173 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065471 5270 Rosid View MSA
123740257 5271 Pentapetalae View MSA
122789491 5272 Eudicot View MSA
122042387 5273 Angiosperm View MSA
121346103 5274 Embryophyte View MSA
123425546 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.7613 0.0 43.7194    
cufflinks 22.2454 0.0 49.3109    
cufflinks 21.9857 0.0 48.7127    
cufflinks 25.1233 0.0 55.8534    
cufflinks 12.3063 0.0 27.3002   Low
cufflinks 21.4479 0.0 47.4734    

0 Strain