Gene : Eucgr.J02389 E. grandis v2.0
Defline:  (1 of 3) PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Genomic Order:  2021
Name:  ? Eucgr.J02389 Secondary Identifier:  ? PAC:32033578
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02389 0.5kb upstream 0.5kb upstream 2244 true Chr10: 28994754-28996997 Eucalyptus grandis
Eucgr.J02389 0.5kb upstream 0.5kb upstream 500 false Chr10: 28996498-28996997 Eucalyptus grandis
Eucgr.J02389 0.5kb downstream 0.5kb downstream 2244 true Chr10: 28994254-28996497 Eucalyptus grandis
Eucgr.J02389 0.5kb downstream 0.5kb downstream 500 false Chr10: 28994254-28994753 Eucalyptus grandis
Eucgr.J02389 1.0kb upstream 1.0kb upstream 2744 true Chr10: 28994754-28997497 Eucalyptus grandis
Eucgr.J02389 1.0kb upstream 1.0kb upstream 1000 false Chr10: 28996498-28997497 Eucalyptus grandis
Eucgr.J02389 1.0kb downstream 1.0kb downstream 2744 true Chr10: 28993754-28996497 Eucalyptus grandis
Eucgr.J02389 1.0kb downstream 1.0kb downstream 1000 false Chr10: 28993754-28994753 Eucalyptus grandis
Eucgr.J02389 2.0kb upstream 2.0kb upstream 3744 true Chr10: 28994754-28998497 Eucalyptus grandis
Eucgr.J02389 2.0kb upstream 2.0kb upstream 2000 false Chr10: 28996498-28998497 Eucalyptus grandis
Eucgr.J02389 2.0kb downstream 2.0kb downstream 3744 true Chr10: 28992754-28996497 Eucalyptus grandis
Eucgr.J02389 2.0kb downstream 2.0kb downstream 2000 false Chr10: 28992754-28994753 Eucalyptus grandis
Eucgr.J02389 5.0kb upstream 5.0kb upstream 6744 true Chr10: 28994754-29001497 Eucalyptus grandis
Eucgr.J02389 5.0kb upstream 5.0kb upstream 5000 false Chr10: 28996498-29001497 Eucalyptus grandis
Eucgr.J02389 5.0kb downstream 5.0kb downstream 6744 true Chr10: 28989754-28996497 Eucalyptus grandis
Eucgr.J02389 5.0kb downstream 5.0kb downstream 5000 false Chr10: 28989754-28994753 Eucalyptus grandis
Eucgr.J02389 10.0kb upstream 10.0kb upstream 11744 true Chr10: 28994754-29006497 Eucalyptus grandis
Eucgr.J02389 10.0kb upstream 10.0kb upstream 10000 false Chr10: 28996498-29006497 Eucalyptus grandis
Eucgr.J02389 10.0kb downstream 10.0kb downstream 11744 true Chr10: 28984754-28996497 Eucalyptus grandis
Eucgr.J02389 10.0kb downstream 10.0kb downstream 10000 false Chr10: 28984754-28994753 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051795 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.8389 0.0 5.28407   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.74733 0.0 12.5574    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.58822 0.0 11.9358    

0 Strain