Gene : Eucgr.J02398 E. grandis v2.0
Defline:  (1 of 5) PF11833 - Protein of unknown function (DUF3353) (DUF3353) Genomic Order:  2029
Name:  ? Eucgr.J02398 Secondary Identifier:  ? PAC:32033110
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02398 0.5kb upstream 0.5kb upstream 3796 true Chr10: 29119221-29123016 Eucalyptus grandis
Eucgr.J02398 0.5kb upstream 0.5kb upstream 500 false Chr10: 29119221-29119720 Eucalyptus grandis
Eucgr.J02398 0.5kb downstream 0.5kb downstream 3796 true Chr10: 29119721-29123516 Eucalyptus grandis
Eucgr.J02398 0.5kb downstream 0.5kb downstream 500 false Chr10: 29123017-29123516 Eucalyptus grandis
Eucgr.J02398 1.0kb upstream 1.0kb upstream 4296 true Chr10: 29118721-29123016 Eucalyptus grandis
Eucgr.J02398 1.0kb upstream 1.0kb upstream 1000 false Chr10: 29118721-29119720 Eucalyptus grandis
Eucgr.J02398 1.0kb downstream 1.0kb downstream 4296 true Chr10: 29119721-29124016 Eucalyptus grandis
Eucgr.J02398 1.0kb downstream 1.0kb downstream 1000 false Chr10: 29123017-29124016 Eucalyptus grandis
Eucgr.J02398 2.0kb upstream 2.0kb upstream 5296 true Chr10: 29117721-29123016 Eucalyptus grandis
Eucgr.J02398 2.0kb upstream 2.0kb upstream 2000 false Chr10: 29117721-29119720 Eucalyptus grandis
Eucgr.J02398 2.0kb downstream 2.0kb downstream 5296 true Chr10: 29119721-29125016 Eucalyptus grandis
Eucgr.J02398 2.0kb downstream 2.0kb downstream 2000 false Chr10: 29123017-29125016 Eucalyptus grandis
Eucgr.J02398 5.0kb upstream 5.0kb upstream 8296 true Chr10: 29114721-29123016 Eucalyptus grandis
Eucgr.J02398 5.0kb upstream 5.0kb upstream 5000 false Chr10: 29114721-29119720 Eucalyptus grandis
Eucgr.J02398 5.0kb downstream 5.0kb downstream 8296 true Chr10: 29119721-29128016 Eucalyptus grandis
Eucgr.J02398 5.0kb downstream 5.0kb downstream 5000 false Chr10: 29123017-29128016 Eucalyptus grandis
Eucgr.J02398 10.0kb upstream 10.0kb upstream 13296 true Chr10: 29109721-29123016 Eucalyptus grandis
Eucgr.J02398 10.0kb upstream 10.0kb upstream 10000 false Chr10: 29109721-29119720 Eucalyptus grandis
Eucgr.J02398 10.0kb downstream 10.0kb downstream 13296 true Chr10: 29119721-29133016 Eucalyptus grandis
Eucgr.J02398 10.0kb downstream 10.0kb downstream 10000 false Chr10: 29123017-29133016 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064221 5270 Rosid View MSA
123752035 5271 Pentapetalae View MSA
122790420 5272 Eudicot View MSA
122050900 5273 Angiosperm View MSA
121343809 5274 Embryophyte View MSA
123427732 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.8778 0.0 29.6487   High
cufflinks 2.26948 0.0 6.69549   Low
cufflinks 5.8627 0.0 18.1778    
cufflinks 3.57646 0.0 10.1192    
cufflinks 7.73087 0.0 19.0994    
cufflinks 8.67582 0.0 25.2052    

0 Strain