Gene : Eucgr.K00043 E. grandis v2.0
Defline:  (1 of 6) PTHR21713 - NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED Genomic Order:  420
Name:  ? Eucgr.K00043 Secondary Identifier:  ? PAC:32069643
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00043 0.5kb upstream 0.5kb upstream 2826 true Chr11: 5481769-5484594 Eucalyptus grandis
Eucgr.K00043 0.5kb upstream 0.5kb upstream 500 false Chr11: 5481769-5482268 Eucalyptus grandis
Eucgr.K00043 0.5kb downstream 0.5kb downstream 2826 true Chr11: 5482269-5485094 Eucalyptus grandis
Eucgr.K00043 0.5kb downstream 0.5kb downstream 500 false Chr11: 5484595-5485094 Eucalyptus grandis
Eucgr.K00043 1.0kb upstream 1.0kb upstream 3326 true Chr11: 5481269-5484594 Eucalyptus grandis
Eucgr.K00043 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5481269-5482268 Eucalyptus grandis
Eucgr.K00043 1.0kb downstream 1.0kb downstream 3326 true Chr11: 5482269-5485594 Eucalyptus grandis
Eucgr.K00043 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5484595-5485594 Eucalyptus grandis
Eucgr.K00043 2.0kb upstream 2.0kb upstream 4326 true Chr11: 5480269-5484594 Eucalyptus grandis
Eucgr.K00043 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5480269-5482268 Eucalyptus grandis
Eucgr.K00043 2.0kb downstream 2.0kb downstream 4326 true Chr11: 5482269-5486594 Eucalyptus grandis
Eucgr.K00043 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5484595-5486594 Eucalyptus grandis
Eucgr.K00043 5.0kb upstream 5.0kb upstream 7326 true Chr11: 5477269-5484594 Eucalyptus grandis
Eucgr.K00043 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5477269-5482268 Eucalyptus grandis
Eucgr.K00043 5.0kb downstream 5.0kb downstream 7326 true Chr11: 5482269-5489594 Eucalyptus grandis
Eucgr.K00043 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5484595-5489594 Eucalyptus grandis
Eucgr.K00043 10.0kb upstream 10.0kb upstream 12326 true Chr11: 5472269-5484594 Eucalyptus grandis
Eucgr.K00043 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5472269-5482268 Eucalyptus grandis
Eucgr.K00043 10.0kb downstream 10.0kb downstream 12326 true Chr11: 5482269-5494594 Eucalyptus grandis
Eucgr.K00043 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5484595-5494594 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062483 5270 Rosid View MSA
123753516 5271 Pentapetalae View MSA
122797192 5272 Eudicot View MSA
122043596 5273 Angiosperm View MSA
121351312 5274 Embryophyte View MSA
123424753 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.0505 0.0 128.713 High  
cufflinks 29.6238 0.0 65.9141   Low
cufflinks 45.0845 0.0 99.7035 High  
cufflinks 41.0959 0.0 90.8973 High  
cufflinks 69.1311 0.0 153.787 High High
cufflinks 44.4333 0.0 98.2661 High  

0 Strain