Gene : Eucgr.J03144 E. grandis v2.0
Defline:  (1 of 4) KOG1397 - Ca2+/H+ antiporter VCX1 and related proteins Genomic Order:  2610
Name:  ? Eucgr.J03144 Secondary Identifier:  ? PAC:32032943
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J03144 0.5kb upstream 0.5kb upstream 6215 true Chr10: 36890070-36896284 Eucalyptus grandis
Eucgr.J03144 0.5kb upstream 0.5kb upstream 500 false Chr10: 36895785-36896284 Eucalyptus grandis
Eucgr.J03144 0.5kb downstream 0.5kb downstream 6215 true Chr10: 36889570-36895784 Eucalyptus grandis
Eucgr.J03144 0.5kb downstream 0.5kb downstream 500 false Chr10: 36889570-36890069 Eucalyptus grandis
Eucgr.J03144 1.0kb upstream 1.0kb upstream 6715 true Chr10: 36890070-36896784 Eucalyptus grandis
Eucgr.J03144 1.0kb upstream 1.0kb upstream 1000 false Chr10: 36895785-36896784 Eucalyptus grandis
Eucgr.J03144 1.0kb downstream 1.0kb downstream 6715 true Chr10: 36889070-36895784 Eucalyptus grandis
Eucgr.J03144 1.0kb downstream 1.0kb downstream 1000 false Chr10: 36889070-36890069 Eucalyptus grandis
Eucgr.J03144 2.0kb upstream 2.0kb upstream 7715 true Chr10: 36890070-36897784 Eucalyptus grandis
Eucgr.J03144 2.0kb upstream 2.0kb upstream 2000 false Chr10: 36895785-36897784 Eucalyptus grandis
Eucgr.J03144 2.0kb downstream 2.0kb downstream 7715 true Chr10: 36888070-36895784 Eucalyptus grandis
Eucgr.J03144 2.0kb downstream 2.0kb downstream 2000 false Chr10: 36888070-36890069 Eucalyptus grandis
Eucgr.J03144 5.0kb upstream 5.0kb upstream 10715 true Chr10: 36890070-36900784 Eucalyptus grandis
Eucgr.J03144 5.0kb upstream 5.0kb upstream 5000 false Chr10: 36895785-36900784 Eucalyptus grandis
Eucgr.J03144 5.0kb downstream 5.0kb downstream 10715 true Chr10: 36885070-36895784 Eucalyptus grandis
Eucgr.J03144 5.0kb downstream 5.0kb downstream 5000 false Chr10: 36885070-36890069 Eucalyptus grandis
Eucgr.J03144 10.0kb upstream 10.0kb upstream 15715 true Chr10: 36890070-36905784 Eucalyptus grandis
Eucgr.J03144 10.0kb upstream 10.0kb upstream 10000 false Chr10: 36895785-36905784 Eucalyptus grandis
Eucgr.J03144 10.0kb downstream 10.0kb downstream 15715 true Chr10: 36880070-36895784 Eucalyptus grandis
Eucgr.J03144 10.0kb downstream 10.0kb downstream 10000 false Chr10: 36880070-36890069 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071439 5270 Rosid View MSA
123747660 5271 Pentapetalae View MSA
122792881 5272 Eudicot View MSA
122045212 5273 Angiosperm View MSA
121347037 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.24974 0.0 21.5436    
cufflinks 11.5601 0.0 26.5833    
cufflinks 9.74558 0.0 27.9079    
cufflinks 15.7455 0.0 40.4418    
cufflinks 28.3975 0.0 73.4232   High
cufflinks 8.75763 0.0 25.1174    

0 Strain