Gene : Eucgr.J03133 E. grandis v2.0
Defline:  (1 of 1) PTHR16517:SF27 - TUBBY-LIKE PROTEIN 8 Genomic Order:  2599
Name:  ? Eucgr.J03133 Secondary Identifier:  ? PAC:32033748
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J03133 0.5kb upstream 0.5kb upstream 4575 true Chr10: 36823229-36827803 Eucalyptus grandis
Eucgr.J03133 0.5kb upstream 0.5kb upstream 500 false Chr10: 36827304-36827803 Eucalyptus grandis
Eucgr.J03133 0.5kb downstream 0.5kb downstream 4575 true Chr10: 36822729-36827303 Eucalyptus grandis
Eucgr.J03133 0.5kb downstream 0.5kb downstream 500 false Chr10: 36822729-36823228 Eucalyptus grandis
Eucgr.J03133 1.0kb upstream 1.0kb upstream 5075 true Chr10: 36823229-36828303 Eucalyptus grandis
Eucgr.J03133 1.0kb upstream 1.0kb upstream 1000 false Chr10: 36827304-36828303 Eucalyptus grandis
Eucgr.J03133 1.0kb downstream 1.0kb downstream 5075 true Chr10: 36822229-36827303 Eucalyptus grandis
Eucgr.J03133 1.0kb downstream 1.0kb downstream 1000 false Chr10: 36822229-36823228 Eucalyptus grandis
Eucgr.J03133 2.0kb upstream 2.0kb upstream 6075 true Chr10: 36823229-36829303 Eucalyptus grandis
Eucgr.J03133 2.0kb upstream 2.0kb upstream 2000 false Chr10: 36827304-36829303 Eucalyptus grandis
Eucgr.J03133 2.0kb downstream 2.0kb downstream 6075 true Chr10: 36821229-36827303 Eucalyptus grandis
Eucgr.J03133 2.0kb downstream 2.0kb downstream 2000 false Chr10: 36821229-36823228 Eucalyptus grandis
Eucgr.J03133 5.0kb upstream 5.0kb upstream 9075 true Chr10: 36823229-36832303 Eucalyptus grandis
Eucgr.J03133 5.0kb upstream 5.0kb upstream 5000 false Chr10: 36827304-36832303 Eucalyptus grandis
Eucgr.J03133 5.0kb downstream 5.0kb downstream 9075 true Chr10: 36818229-36827303 Eucalyptus grandis
Eucgr.J03133 5.0kb downstream 5.0kb downstream 5000 false Chr10: 36818229-36823228 Eucalyptus grandis
Eucgr.J03133 10.0kb upstream 10.0kb upstream 14075 true Chr10: 36823229-36837303 Eucalyptus grandis
Eucgr.J03133 10.0kb upstream 10.0kb upstream 10000 false Chr10: 36827304-36837303 Eucalyptus grandis
Eucgr.J03133 10.0kb downstream 10.0kb downstream 14075 true Chr10: 36813229-36827303 Eucalyptus grandis
Eucgr.J03133 10.0kb downstream 10.0kb downstream 10000 false Chr10: 36813229-36823228 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063219 5270 Rosid View MSA
123740290 5271 Pentapetalae View MSA
122793260 5272 Eudicot View MSA
122048608 5273 Angiosperm View MSA
121311037 5274 Embryophyte View MSA
123348391 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.78714 0.0 13.8143   High
cufflinks 0.667507 0.0 1.97533 Low Low
cufflinks 2.48526 0.0 6.45088    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.908537 0.0 2.5976    
cufflinks 1.77495 0.0 4.77031    

0 Strain