Gene : Eucgr.J03137 E. grandis v2.0
Defline:  (1 of 1) PTHR10621:SF9 - F12F1.16 PROTEIN-RELATED Genomic Order:  2603
Name:  ? Eucgr.J03137 Secondary Identifier:  ? PAC:32033193
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J03137 0.5kb upstream 0.5kb upstream 5480 true Chr10: 36860153-36865632 Eucalyptus grandis
Eucgr.J03137 0.5kb upstream 0.5kb upstream 500 false Chr10: 36865133-36865632 Eucalyptus grandis
Eucgr.J03137 0.5kb downstream 0.5kb downstream 5480 true Chr10: 36859653-36865132 Eucalyptus grandis
Eucgr.J03137 0.5kb downstream 0.5kb downstream 500 false Chr10: 36859653-36860152 Eucalyptus grandis
Eucgr.J03137 1.0kb upstream 1.0kb upstream 5980 true Chr10: 36860153-36866132 Eucalyptus grandis
Eucgr.J03137 1.0kb upstream 1.0kb upstream 1000 false Chr10: 36865133-36866132 Eucalyptus grandis
Eucgr.J03137 1.0kb downstream 1.0kb downstream 5980 true Chr10: 36859153-36865132 Eucalyptus grandis
Eucgr.J03137 1.0kb downstream 1.0kb downstream 1000 false Chr10: 36859153-36860152 Eucalyptus grandis
Eucgr.J03137 2.0kb upstream 2.0kb upstream 6980 true Chr10: 36860153-36867132 Eucalyptus grandis
Eucgr.J03137 2.0kb upstream 2.0kb upstream 2000 false Chr10: 36865133-36867132 Eucalyptus grandis
Eucgr.J03137 2.0kb downstream 2.0kb downstream 6980 true Chr10: 36858153-36865132 Eucalyptus grandis
Eucgr.J03137 2.0kb downstream 2.0kb downstream 2000 false Chr10: 36858153-36860152 Eucalyptus grandis
Eucgr.J03137 5.0kb upstream 5.0kb upstream 9980 true Chr10: 36860153-36870132 Eucalyptus grandis
Eucgr.J03137 5.0kb upstream 5.0kb upstream 5000 false Chr10: 36865133-36870132 Eucalyptus grandis
Eucgr.J03137 5.0kb downstream 5.0kb downstream 9980 true Chr10: 36855153-36865132 Eucalyptus grandis
Eucgr.J03137 5.0kb downstream 5.0kb downstream 5000 false Chr10: 36855153-36860152 Eucalyptus grandis
Eucgr.J03137 10.0kb upstream 10.0kb upstream 14980 true Chr10: 36860153-36875132 Eucalyptus grandis
Eucgr.J03137 10.0kb upstream 10.0kb upstream 10000 false Chr10: 36865133-36875132 Eucalyptus grandis
Eucgr.J03137 10.0kb downstream 10.0kb downstream 14980 true Chr10: 36850153-36865132 Eucalyptus grandis
Eucgr.J03137 10.0kb downstream 10.0kb downstream 10000 false Chr10: 36850153-36860152 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061824 5270 Rosid View MSA
123740240 5271 Pentapetalae View MSA
122785996 5272 Eudicot View MSA
122046102 5273 Angiosperm View MSA
121350140 5274 Embryophyte View MSA
123423951 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.7563 0.0 88.6937 High High
cufflinks 15.7676 0.0 35.4278   Low
cufflinks 27.9303 0.0 69.1779 High  
cufflinks 18.8122 0.0 48.7592    
cufflinks 26.3516 0.0 62.5098    
cufflinks 25.1634 0.0 67.0008    

0 Strain