Gene : Eucgr.J03093 E. grandis v2.0
Defline:  (1 of 4) PF14709 - double strand RNA binding domain from DEAD END PROTEIN 1 (DND1_DSRM) Genomic Order:  2562
Name:  ? Eucgr.J03093 Secondary Identifier:  ? PAC:32034778
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J03093 0.5kb upstream 0.5kb upstream 3029 true Chr10: 36421417-36424445 Eucalyptus grandis
Eucgr.J03093 0.5kb upstream 0.5kb upstream 500 false Chr10: 36421417-36421916 Eucalyptus grandis
Eucgr.J03093 0.5kb downstream 0.5kb downstream 3029 true Chr10: 36421917-36424945 Eucalyptus grandis
Eucgr.J03093 0.5kb downstream 0.5kb downstream 500 false Chr10: 36424446-36424945 Eucalyptus grandis
Eucgr.J03093 1.0kb upstream 1.0kb upstream 3529 true Chr10: 36420917-36424445 Eucalyptus grandis
Eucgr.J03093 1.0kb upstream 1.0kb upstream 1000 false Chr10: 36420917-36421916 Eucalyptus grandis
Eucgr.J03093 1.0kb downstream 1.0kb downstream 3529 true Chr10: 36421917-36425445 Eucalyptus grandis
Eucgr.J03093 1.0kb downstream 1.0kb downstream 1000 false Chr10: 36424446-36425445 Eucalyptus grandis
Eucgr.J03093 2.0kb upstream 2.0kb upstream 4529 true Chr10: 36419917-36424445 Eucalyptus grandis
Eucgr.J03093 2.0kb upstream 2.0kb upstream 2000 false Chr10: 36419917-36421916 Eucalyptus grandis
Eucgr.J03093 2.0kb downstream 2.0kb downstream 4529 true Chr10: 36421917-36426445 Eucalyptus grandis
Eucgr.J03093 2.0kb downstream 2.0kb downstream 2000 false Chr10: 36424446-36426445 Eucalyptus grandis
Eucgr.J03093 5.0kb upstream 5.0kb upstream 7529 true Chr10: 36416917-36424445 Eucalyptus grandis
Eucgr.J03093 5.0kb upstream 5.0kb upstream 5000 false Chr10: 36416917-36421916 Eucalyptus grandis
Eucgr.J03093 5.0kb downstream 5.0kb downstream 7529 true Chr10: 36421917-36429445 Eucalyptus grandis
Eucgr.J03093 5.0kb downstream 5.0kb downstream 5000 false Chr10: 36424446-36429445 Eucalyptus grandis
Eucgr.J03093 10.0kb upstream 10.0kb upstream 12529 true Chr10: 36411917-36424445 Eucalyptus grandis
Eucgr.J03093 10.0kb upstream 10.0kb upstream 10000 false Chr10: 36411917-36421916 Eucalyptus grandis
Eucgr.J03093 10.0kb downstream 10.0kb downstream 12529 true Chr10: 36421917-36434445 Eucalyptus grandis
Eucgr.J03093 10.0kb downstream 10.0kb downstream 10000 false Chr10: 36424446-36434445 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028050 5273 Angiosperm View MSA
124050463 5270 Rosid View MSA
123746179 5271 Pentapetalae View MSA
122771807 5272 Eudicot View MSA
121297597 5274 Embryophyte View MSA
123335637 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.545883 0.0 2.00833   Low
cufflinks 4.10831 0.0 10.6661    
cufflinks 1.39362 0.0 4.20808    
cufflinks 0.844485 0.0 2.71147    
cufflinks 6.19609 0.0 15.2962   High
cufflinks 3.41505 0.0 10.1451    

0 Strain