Gene : Eucgr.J03102 E. grandis v2.0
Defline:  (1 of 1) PTHR11524:SF11 - 60S RIBOSOMAL PROTEIN L7-1 Genomic Order:  2570
Name:  ? Eucgr.J03102 Secondary Identifier:  ? PAC:32033677
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J03102 0.5kb upstream 0.5kb upstream 4420 true Chr10: 36516186-36520605 Eucalyptus grandis
Eucgr.J03102 0.5kb upstream 0.5kb upstream 500 false Chr10: 36516186-36516685 Eucalyptus grandis
Eucgr.J03102 0.5kb downstream 0.5kb downstream 4420 true Chr10: 36516686-36521105 Eucalyptus grandis
Eucgr.J03102 0.5kb downstream 0.5kb downstream 500 false Chr10: 36520606-36521105 Eucalyptus grandis
Eucgr.J03102 1.0kb upstream 1.0kb upstream 4920 true Chr10: 36515686-36520605 Eucalyptus grandis
Eucgr.J03102 1.0kb upstream 1.0kb upstream 1000 false Chr10: 36515686-36516685 Eucalyptus grandis
Eucgr.J03102 1.0kb downstream 1.0kb downstream 4920 true Chr10: 36516686-36521605 Eucalyptus grandis
Eucgr.J03102 1.0kb downstream 1.0kb downstream 1000 false Chr10: 36520606-36521605 Eucalyptus grandis
Eucgr.J03102 2.0kb upstream 2.0kb upstream 5920 true Chr10: 36514686-36520605 Eucalyptus grandis
Eucgr.J03102 2.0kb upstream 2.0kb upstream 2000 false Chr10: 36514686-36516685 Eucalyptus grandis
Eucgr.J03102 2.0kb downstream 2.0kb downstream 5920 true Chr10: 36516686-36522605 Eucalyptus grandis
Eucgr.J03102 2.0kb downstream 2.0kb downstream 2000 false Chr10: 36520606-36522605 Eucalyptus grandis
Eucgr.J03102 5.0kb upstream 5.0kb upstream 8920 true Chr10: 36511686-36520605 Eucalyptus grandis
Eucgr.J03102 5.0kb upstream 5.0kb upstream 5000 false Chr10: 36511686-36516685 Eucalyptus grandis
Eucgr.J03102 5.0kb downstream 5.0kb downstream 8920 true Chr10: 36516686-36525605 Eucalyptus grandis
Eucgr.J03102 5.0kb downstream 5.0kb downstream 5000 false Chr10: 36520606-36525605 Eucalyptus grandis
Eucgr.J03102 10.0kb upstream 10.0kb upstream 13920 true Chr10: 36506686-36520605 Eucalyptus grandis
Eucgr.J03102 10.0kb upstream 10.0kb upstream 10000 false Chr10: 36506686-36516685 Eucalyptus grandis
Eucgr.J03102 10.0kb downstream 10.0kb downstream 13920 true Chr10: 36516686-36530605 Eucalyptus grandis
Eucgr.J03102 10.0kb downstream 10.0kb downstream 10000 false Chr10: 36520606-36530605 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065700 5270 Rosid View MSA
123743124 5271 Pentapetalae View MSA
122794079 5272 Eudicot View MSA
122048925 5273 Angiosperm View MSA
121311173 5274 Embryophyte View MSA
123348505 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.6781 0.0 26.4006    
cufflinks 10.7402 0.0 24.3082   Low
cufflinks 12.2805 0.0 27.6473    
cufflinks 13.7284 0.0 30.6958    
cufflinks 14.0077 0.0 31.3623    
cufflinks 14.138 0.0 31.6798    

0 Strain