Gene : Eucgr.J03103 E. grandis v2.0
Defline:  (1 of 1) PTHR19139:SF170 - AQUAPORIN NIP6-1 Genomic Order:  2571
Name:  ? Eucgr.J03103 Secondary Identifier:  ? PAC:32035451
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J03103 0.5kb upstream 0.5kb upstream 3714 true Chr10: 36522139-36525852 Eucalyptus grandis
Eucgr.J03103 0.5kb upstream 0.5kb upstream 500 false Chr10: 36525353-36525852 Eucalyptus grandis
Eucgr.J03103 0.5kb downstream 0.5kb downstream 3714 true Chr10: 36521639-36525352 Eucalyptus grandis
Eucgr.J03103 0.5kb downstream 0.5kb downstream 500 false Chr10: 36521639-36522138 Eucalyptus grandis
Eucgr.J03103 1.0kb upstream 1.0kb upstream 4214 true Chr10: 36522139-36526352 Eucalyptus grandis
Eucgr.J03103 1.0kb upstream 1.0kb upstream 1000 false Chr10: 36525353-36526352 Eucalyptus grandis
Eucgr.J03103 1.0kb downstream 1.0kb downstream 4214 true Chr10: 36521139-36525352 Eucalyptus grandis
Eucgr.J03103 1.0kb downstream 1.0kb downstream 1000 false Chr10: 36521139-36522138 Eucalyptus grandis
Eucgr.J03103 2.0kb upstream 2.0kb upstream 5214 true Chr10: 36522139-36527352 Eucalyptus grandis
Eucgr.J03103 2.0kb upstream 2.0kb upstream 2000 false Chr10: 36525353-36527352 Eucalyptus grandis
Eucgr.J03103 2.0kb downstream 2.0kb downstream 5214 true Chr10: 36520139-36525352 Eucalyptus grandis
Eucgr.J03103 2.0kb downstream 2.0kb downstream 2000 false Chr10: 36520139-36522138 Eucalyptus grandis
Eucgr.J03103 5.0kb upstream 5.0kb upstream 8214 true Chr10: 36522139-36530352 Eucalyptus grandis
Eucgr.J03103 5.0kb upstream 5.0kb upstream 5000 false Chr10: 36525353-36530352 Eucalyptus grandis
Eucgr.J03103 5.0kb downstream 5.0kb downstream 8214 true Chr10: 36517139-36525352 Eucalyptus grandis
Eucgr.J03103 5.0kb downstream 5.0kb downstream 5000 false Chr10: 36517139-36522138 Eucalyptus grandis
Eucgr.J03103 10.0kb upstream 10.0kb upstream 13214 true Chr10: 36522139-36535352 Eucalyptus grandis
Eucgr.J03103 10.0kb upstream 10.0kb upstream 10000 false Chr10: 36525353-36535352 Eucalyptus grandis
Eucgr.J03103 10.0kb downstream 10.0kb downstream 13214 true Chr10: 36512139-36525352 Eucalyptus grandis
Eucgr.J03103 10.0kb downstream 10.0kb downstream 10000 false Chr10: 36512139-36522138 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065491 5270 Rosid View MSA
123738627 5271 Pentapetalae View MSA
122786860 5272 Eudicot View MSA
122045957 5273 Angiosperm View MSA
121349244 5274 Embryophyte View MSA
123427856 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.746852 0.0 2.2619    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0714838 0.0 0.323703 Low Low
cufflinks 0.391068 0.0 1.27189 Low  
cufflinks 0.601521 0.0 1.86054 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain