Gene : Eucgr.J03086 E. grandis v2.0
Defline:  (1 of 1) PTHR34948:SF2 - TRIPHOSPHATE TUNEL METALLOENZYME 3 Genomic Order:  2555
Name:  ? Eucgr.J03086 Secondary Identifier:  ? PAC:32034418
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J03086 0.5kb upstream 0.5kb upstream 1990 true Chr10: 36343184-36345173 Eucalyptus grandis
Eucgr.J03086 0.5kb upstream 0.5kb upstream 500 false Chr10: 36343184-36343683 Eucalyptus grandis
Eucgr.J03086 0.5kb downstream 0.5kb downstream 1990 true Chr10: 36343684-36345673 Eucalyptus grandis
Eucgr.J03086 0.5kb downstream 0.5kb downstream 500 false Chr10: 36345174-36345673 Eucalyptus grandis
Eucgr.J03086 1.0kb upstream 1.0kb upstream 2490 true Chr10: 36342684-36345173 Eucalyptus grandis
Eucgr.J03086 1.0kb upstream 1.0kb upstream 1000 false Chr10: 36342684-36343683 Eucalyptus grandis
Eucgr.J03086 1.0kb downstream 1.0kb downstream 2490 true Chr10: 36343684-36346173 Eucalyptus grandis
Eucgr.J03086 1.0kb downstream 1.0kb downstream 1000 false Chr10: 36345174-36346173 Eucalyptus grandis
Eucgr.J03086 2.0kb upstream 2.0kb upstream 3490 true Chr10: 36341684-36345173 Eucalyptus grandis
Eucgr.J03086 2.0kb upstream 2.0kb upstream 2000 false Chr10: 36341684-36343683 Eucalyptus grandis
Eucgr.J03086 2.0kb downstream 2.0kb downstream 3490 true Chr10: 36343684-36347173 Eucalyptus grandis
Eucgr.J03086 2.0kb downstream 2.0kb downstream 2000 false Chr10: 36345174-36347173 Eucalyptus grandis
Eucgr.J03086 5.0kb upstream 5.0kb upstream 6490 true Chr10: 36338684-36345173 Eucalyptus grandis
Eucgr.J03086 5.0kb upstream 5.0kb upstream 5000 false Chr10: 36338684-36343683 Eucalyptus grandis
Eucgr.J03086 5.0kb downstream 5.0kb downstream 6490 true Chr10: 36343684-36350173 Eucalyptus grandis
Eucgr.J03086 5.0kb downstream 5.0kb downstream 5000 false Chr10: 36345174-36350173 Eucalyptus grandis
Eucgr.J03086 10.0kb upstream 10.0kb upstream 11490 true Chr10: 36333684-36345173 Eucalyptus grandis
Eucgr.J03086 10.0kb upstream 10.0kb upstream 10000 false Chr10: 36333684-36343683 Eucalyptus grandis
Eucgr.J03086 10.0kb downstream 10.0kb downstream 11490 true Chr10: 36343684-36355173 Eucalyptus grandis
Eucgr.J03086 10.0kb downstream 10.0kb downstream 10000 false Chr10: 36345174-36355173 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070070 5270 Rosid View MSA
123747724 5271 Pentapetalae View MSA
122786251 5272 Eudicot View MSA
122047583 5273 Angiosperm View MSA
121347010 5274 Embryophyte View MSA
123425047 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.2277 0.0 24.29    
cufflinks 10.8555 0.0 32.6603    
cufflinks 5.37481 0.0 18.1174    
cufflinks 2.49386 0.0 7.2937   Low
cufflinks 13.7372 0.0 45.1006    
cufflinks 23.5119 0.0 64.3221   High

0 Strain