Gene : Eucgr.J03066 E. grandis v2.0
Defline:  (1 of 2) PTHR13780:SF51 - SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA-LIKE PV42A-RELATED Genomic Order:  2536
Name:  ? Eucgr.J03066 Secondary Identifier:  ? PAC:32032550
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J03066 0.5kb upstream 0.5kb upstream 2465 true Chr10: 36134775-36137239 Eucalyptus grandis
Eucgr.J03066 0.5kb upstream 0.5kb upstream 500 false Chr10: 36136740-36137239 Eucalyptus grandis
Eucgr.J03066 0.5kb downstream 0.5kb downstream 2465 true Chr10: 36134275-36136739 Eucalyptus grandis
Eucgr.J03066 0.5kb downstream 0.5kb downstream 500 false Chr10: 36134275-36134774 Eucalyptus grandis
Eucgr.J03066 1.0kb upstream 1.0kb upstream 2965 true Chr10: 36134775-36137739 Eucalyptus grandis
Eucgr.J03066 1.0kb upstream 1.0kb upstream 1000 false Chr10: 36136740-36137739 Eucalyptus grandis
Eucgr.J03066 1.0kb downstream 1.0kb downstream 2965 true Chr10: 36133775-36136739 Eucalyptus grandis
Eucgr.J03066 1.0kb downstream 1.0kb downstream 1000 false Chr10: 36133775-36134774 Eucalyptus grandis
Eucgr.J03066 2.0kb upstream 2.0kb upstream 3965 true Chr10: 36134775-36138739 Eucalyptus grandis
Eucgr.J03066 2.0kb upstream 2.0kb upstream 2000 false Chr10: 36136740-36138739 Eucalyptus grandis
Eucgr.J03066 2.0kb downstream 2.0kb downstream 3965 true Chr10: 36132775-36136739 Eucalyptus grandis
Eucgr.J03066 2.0kb downstream 2.0kb downstream 2000 false Chr10: 36132775-36134774 Eucalyptus grandis
Eucgr.J03066 5.0kb upstream 5.0kb upstream 6965 true Chr10: 36134775-36141739 Eucalyptus grandis
Eucgr.J03066 5.0kb upstream 5.0kb upstream 5000 false Chr10: 36136740-36141739 Eucalyptus grandis
Eucgr.J03066 5.0kb downstream 5.0kb downstream 6965 true Chr10: 36129775-36136739 Eucalyptus grandis
Eucgr.J03066 5.0kb downstream 5.0kb downstream 5000 false Chr10: 36129775-36134774 Eucalyptus grandis
Eucgr.J03066 10.0kb upstream 10.0kb upstream 11965 true Chr10: 36134775-36146739 Eucalyptus grandis
Eucgr.J03066 10.0kb upstream 10.0kb upstream 10000 false Chr10: 36136740-36146739 Eucalyptus grandis
Eucgr.J03066 10.0kb downstream 10.0kb downstream 11965 true Chr10: 36124775-36136739 Eucalyptus grandis
Eucgr.J03066 10.0kb downstream 10.0kb downstream 10000 false Chr10: 36124775-36134774 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061084 5270 Rosid View MSA
123738875 5271 Pentapetalae View MSA
122797482 5272 Eudicot View MSA
122042639 5273 Angiosperm View MSA
121347644 5274 Embryophyte View MSA
123427907 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.222056 0.0 0.830325 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.114043 0.0 0.516425 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain