Gene : Eucgr.J03076 E. grandis v2.0
Defline:  (1 of 20) PF03101//PF04434//PF10551 - FAR1 DNA-binding domain (FAR1) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  2546
Name:  ? Eucgr.J03076 Secondary Identifier:  ? PAC:32032815
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J03076 0.5kb upstream 0.5kb upstream 3143 true Chr10: 36297666-36300808 Eucalyptus grandis
Eucgr.J03076 0.5kb upstream 0.5kb upstream 500 false Chr10: 36297666-36298165 Eucalyptus grandis
Eucgr.J03076 0.5kb downstream 0.5kb downstream 3143 true Chr10: 36298166-36301308 Eucalyptus grandis
Eucgr.J03076 0.5kb downstream 0.5kb downstream 500 false Chr10: 36300809-36301308 Eucalyptus grandis
Eucgr.J03076 1.0kb upstream 1.0kb upstream 3643 true Chr10: 36297166-36300808 Eucalyptus grandis
Eucgr.J03076 1.0kb upstream 1.0kb upstream 1000 false Chr10: 36297166-36298165 Eucalyptus grandis
Eucgr.J03076 1.0kb downstream 1.0kb downstream 3643 true Chr10: 36298166-36301808 Eucalyptus grandis
Eucgr.J03076 1.0kb downstream 1.0kb downstream 1000 false Chr10: 36300809-36301808 Eucalyptus grandis
Eucgr.J03076 2.0kb upstream 2.0kb upstream 4643 true Chr10: 36296166-36300808 Eucalyptus grandis
Eucgr.J03076 2.0kb upstream 2.0kb upstream 2000 false Chr10: 36296166-36298165 Eucalyptus grandis
Eucgr.J03076 2.0kb downstream 2.0kb downstream 4643 true Chr10: 36298166-36302808 Eucalyptus grandis
Eucgr.J03076 2.0kb downstream 2.0kb downstream 2000 false Chr10: 36300809-36302808 Eucalyptus grandis
Eucgr.J03076 5.0kb upstream 5.0kb upstream 7643 true Chr10: 36293166-36300808 Eucalyptus grandis
Eucgr.J03076 5.0kb upstream 5.0kb upstream 5000 false Chr10: 36293166-36298165 Eucalyptus grandis
Eucgr.J03076 5.0kb downstream 5.0kb downstream 7643 true Chr10: 36298166-36305808 Eucalyptus grandis
Eucgr.J03076 5.0kb downstream 5.0kb downstream 5000 false Chr10: 36300809-36305808 Eucalyptus grandis
Eucgr.J03076 10.0kb upstream 10.0kb upstream 12643 true Chr10: 36288166-36300808 Eucalyptus grandis
Eucgr.J03076 10.0kb upstream 10.0kb upstream 10000 false Chr10: 36288166-36298165 Eucalyptus grandis
Eucgr.J03076 10.0kb downstream 10.0kb downstream 12643 true Chr10: 36298166-36310808 Eucalyptus grandis
Eucgr.J03076 10.0kb downstream 10.0kb downstream 10000 false Chr10: 36300809-36310808 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074797 5270 Rosid View MSA
123752010 5271 Pentapetalae View MSA
122794542 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.466154 0.0 1.41179 Low  
cufflinks 0.796585 0.0 2.25604 Low High
cufflinks 0.545375 0.0 1.61306    
cufflinks 0.319175 0.0 1.00016 Low Low
cufflinks 0.375218 0.0 1.16057 Low  
cufflinks 0.595157 0.0 1.75963 Low  

0 Strain