Gene : Eucgr.J03040 E. grandis v2.0
Defline:  (1 of 1) PTHR19858 - WD40 REPEAT PROTEIN Genomic Order:  2511
Name:  ? Eucgr.J03040 Secondary Identifier:  ? PAC:32034368
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J03040 0.5kb upstream 0.5kb upstream 6252 true Chr10: 35960240-35966491 Eucalyptus grandis
Eucgr.J03040 0.5kb upstream 0.5kb upstream 500 false Chr10: 35960240-35960739 Eucalyptus grandis
Eucgr.J03040 0.5kb downstream 0.5kb downstream 6252 true Chr10: 35960740-35966991 Eucalyptus grandis
Eucgr.J03040 0.5kb downstream 0.5kb downstream 500 false Chr10: 35966492-35966991 Eucalyptus grandis
Eucgr.J03040 1.0kb upstream 1.0kb upstream 6752 true Chr10: 35959740-35966491 Eucalyptus grandis
Eucgr.J03040 1.0kb upstream 1.0kb upstream 1000 false Chr10: 35959740-35960739 Eucalyptus grandis
Eucgr.J03040 1.0kb downstream 1.0kb downstream 6752 true Chr10: 35960740-35967491 Eucalyptus grandis
Eucgr.J03040 1.0kb downstream 1.0kb downstream 1000 false Chr10: 35966492-35967491 Eucalyptus grandis
Eucgr.J03040 2.0kb upstream 2.0kb upstream 7752 true Chr10: 35958740-35966491 Eucalyptus grandis
Eucgr.J03040 2.0kb upstream 2.0kb upstream 2000 false Chr10: 35958740-35960739 Eucalyptus grandis
Eucgr.J03040 2.0kb downstream 2.0kb downstream 7752 true Chr10: 35960740-35968491 Eucalyptus grandis
Eucgr.J03040 2.0kb downstream 2.0kb downstream 2000 false Chr10: 35966492-35968491 Eucalyptus grandis
Eucgr.J03040 5.0kb upstream 5.0kb upstream 10752 true Chr10: 35955740-35966491 Eucalyptus grandis
Eucgr.J03040 5.0kb upstream 5.0kb upstream 5000 false Chr10: 35955740-35960739 Eucalyptus grandis
Eucgr.J03040 5.0kb downstream 5.0kb downstream 10752 true Chr10: 35960740-35971491 Eucalyptus grandis
Eucgr.J03040 5.0kb downstream 5.0kb downstream 5000 false Chr10: 35966492-35971491 Eucalyptus grandis
Eucgr.J03040 10.0kb upstream 10.0kb upstream 15752 true Chr10: 35950740-35966491 Eucalyptus grandis
Eucgr.J03040 10.0kb upstream 10.0kb upstream 10000 false Chr10: 35950740-35960739 Eucalyptus grandis
Eucgr.J03040 10.0kb downstream 10.0kb downstream 15752 true Chr10: 35960740-35976491 Eucalyptus grandis
Eucgr.J03040 10.0kb downstream 10.0kb downstream 10000 false Chr10: 35966492-35976491 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068186 5270 Rosid View MSA
123748655 5271 Pentapetalae View MSA
122789333 5272 Eudicot View MSA
122043279 5273 Angiosperm View MSA
121345886 5274 Embryophyte View MSA
123424187 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.90296 0.0 11.6618   High
cufflinks 0.535634 0.0 1.58508 Low Low
cufflinks 2.96819 0.0 7.40074    
cufflinks 1.70992 0.0 4.48493    
cufflinks 0.953543 0.0 2.66359    
cufflinks 4.32966 0.0 10.4321    

0 Strain