Gene : Eucgr.J02985 E. grandis v2.0
Defline:  (1 of 527) PF13041 - PPR repeat family (PPR_2) Genomic Order:  2458
Name:  ? Eucgr.J02985 Secondary Identifier:  ? PAC:32034381
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02985 0.5kb upstream 0.5kb upstream 4773 true Chr10: 35499152-35503924 Eucalyptus grandis
Eucgr.J02985 0.5kb upstream 0.5kb upstream 500 false Chr10: 35499152-35499651 Eucalyptus grandis
Eucgr.J02985 0.5kb downstream 0.5kb downstream 4773 true Chr10: 35499652-35504424 Eucalyptus grandis
Eucgr.J02985 0.5kb downstream 0.5kb downstream 500 false Chr10: 35503925-35504424 Eucalyptus grandis
Eucgr.J02985 1.0kb upstream 1.0kb upstream 5273 true Chr10: 35498652-35503924 Eucalyptus grandis
Eucgr.J02985 1.0kb upstream 1.0kb upstream 1000 false Chr10: 35498652-35499651 Eucalyptus grandis
Eucgr.J02985 1.0kb downstream 1.0kb downstream 5273 true Chr10: 35499652-35504924 Eucalyptus grandis
Eucgr.J02985 1.0kb downstream 1.0kb downstream 1000 false Chr10: 35503925-35504924 Eucalyptus grandis
Eucgr.J02985 2.0kb upstream 2.0kb upstream 6273 true Chr10: 35497652-35503924 Eucalyptus grandis
Eucgr.J02985 2.0kb upstream 2.0kb upstream 2000 false Chr10: 35497652-35499651 Eucalyptus grandis
Eucgr.J02985 2.0kb downstream 2.0kb downstream 6273 true Chr10: 35499652-35505924 Eucalyptus grandis
Eucgr.J02985 2.0kb downstream 2.0kb downstream 2000 false Chr10: 35503925-35505924 Eucalyptus grandis
Eucgr.J02985 5.0kb upstream 5.0kb upstream 9273 true Chr10: 35494652-35503924 Eucalyptus grandis
Eucgr.J02985 5.0kb upstream 5.0kb upstream 5000 false Chr10: 35494652-35499651 Eucalyptus grandis
Eucgr.J02985 5.0kb downstream 5.0kb downstream 9273 true Chr10: 35499652-35508924 Eucalyptus grandis
Eucgr.J02985 5.0kb downstream 5.0kb downstream 5000 false Chr10: 35503925-35508924 Eucalyptus grandis
Eucgr.J02985 10.0kb upstream 10.0kb upstream 14273 true Chr10: 35489652-35503924 Eucalyptus grandis
Eucgr.J02985 10.0kb upstream 10.0kb upstream 10000 false Chr10: 35489652-35499651 Eucalyptus grandis
Eucgr.J02985 10.0kb downstream 10.0kb downstream 14273 true Chr10: 35499652-35513924 Eucalyptus grandis
Eucgr.J02985 10.0kb downstream 10.0kb downstream 10000 false Chr10: 35503925-35513924 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065100 5270 Rosid View MSA
123738721 5271 Pentapetalae View MSA
122787826 5272 Eudicot View MSA
122045787 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121310503 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.77306 0.0 4.66943    
cufflinks 0.254162 0.0 0.818265 Low Low
cufflinks 2.10341 0.0 5.41396    
cufflinks 2.2353 0.0 5.67879    
cufflinks 0.918481 0.0 2.56565    
cufflinks 1.52852 0.0 4.108    

0 Strain