Gene : Eucgr.J02926 E. grandis v2.0
Defline:  (1 of 3) PTHR32472:SF10 - DNA REPAIR PROTEIN RADA-LIKE PROTEIN Genomic Order:  2407
Name:  ? Eucgr.J02926 Secondary Identifier:  ? PAC:32032636
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02926 0.5kb upstream 0.5kb upstream 6638 true Chr10: 34973118-34979755 Eucalyptus grandis
Eucgr.J02926 0.5kb upstream 0.5kb upstream 500 false Chr10: 34973118-34973617 Eucalyptus grandis
Eucgr.J02926 0.5kb downstream 0.5kb downstream 6638 true Chr10: 34973618-34980255 Eucalyptus grandis
Eucgr.J02926 0.5kb downstream 0.5kb downstream 500 false Chr10: 34979756-34980255 Eucalyptus grandis
Eucgr.J02926 1.0kb upstream 1.0kb upstream 7138 true Chr10: 34972618-34979755 Eucalyptus grandis
Eucgr.J02926 1.0kb upstream 1.0kb upstream 1000 false Chr10: 34972618-34973617 Eucalyptus grandis
Eucgr.J02926 1.0kb downstream 1.0kb downstream 7138 true Chr10: 34973618-34980755 Eucalyptus grandis
Eucgr.J02926 1.0kb downstream 1.0kb downstream 1000 false Chr10: 34979756-34980755 Eucalyptus grandis
Eucgr.J02926 2.0kb upstream 2.0kb upstream 8138 true Chr10: 34971618-34979755 Eucalyptus grandis
Eucgr.J02926 2.0kb upstream 2.0kb upstream 2000 false Chr10: 34971618-34973617 Eucalyptus grandis
Eucgr.J02926 2.0kb downstream 2.0kb downstream 8138 true Chr10: 34973618-34981755 Eucalyptus grandis
Eucgr.J02926 2.0kb downstream 2.0kb downstream 2000 false Chr10: 34979756-34981755 Eucalyptus grandis
Eucgr.J02926 5.0kb upstream 5.0kb upstream 11138 true Chr10: 34968618-34979755 Eucalyptus grandis
Eucgr.J02926 5.0kb upstream 5.0kb upstream 5000 false Chr10: 34968618-34973617 Eucalyptus grandis
Eucgr.J02926 5.0kb downstream 5.0kb downstream 11138 true Chr10: 34973618-34984755 Eucalyptus grandis
Eucgr.J02926 5.0kb downstream 5.0kb downstream 5000 false Chr10: 34979756-34984755 Eucalyptus grandis
Eucgr.J02926 10.0kb upstream 10.0kb upstream 16138 true Chr10: 34963618-34979755 Eucalyptus grandis
Eucgr.J02926 10.0kb upstream 10.0kb upstream 10000 false Chr10: 34963618-34973617 Eucalyptus grandis
Eucgr.J02926 10.0kb downstream 10.0kb downstream 16138 true Chr10: 34973618-34989755 Eucalyptus grandis
Eucgr.J02926 10.0kb downstream 10.0kb downstream 10000 false Chr10: 34979756-34989755 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061161 5270 Rosid View MSA
123738270 5271 Pentapetalae View MSA
122793264 5272 Eudicot View MSA
122043621 5273 Angiosperm View MSA
121346798 5274 Embryophyte View MSA
123426216 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.63751 0.0 6.963    
cufflinks 0.283213 0.0 1.05558 Low Low
cufflinks 2.45446 0.0 9.26412    
cufflinks 1.24256 0.0 4.7929    
cufflinks 0.7858 0.0 2.48461    
cufflinks 2.7857 0.0 7.1225    

0 Strain