Gene : Eucgr.J02884 E. grandis v2.0
Defline:  (1 of 26) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  2376
Name:  ? Eucgr.J02884 Secondary Identifier:  ? PAC:32033755
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02884 0.5kb upstream 0.5kb upstream 1981 true Chr10: 34376051-34378031 Eucalyptus grandis
Eucgr.J02884 0.5kb upstream 0.5kb upstream 500 false Chr10: 34376051-34376550 Eucalyptus grandis
Eucgr.J02884 0.5kb downstream 0.5kb downstream 1981 true Chr10: 34376551-34378531 Eucalyptus grandis
Eucgr.J02884 0.5kb downstream 0.5kb downstream 500 false Chr10: 34378032-34378531 Eucalyptus grandis
Eucgr.J02884 1.0kb upstream 1.0kb upstream 2481 true Chr10: 34375551-34378031 Eucalyptus grandis
Eucgr.J02884 1.0kb upstream 1.0kb upstream 1000 false Chr10: 34375551-34376550 Eucalyptus grandis
Eucgr.J02884 1.0kb downstream 1.0kb downstream 2481 true Chr10: 34376551-34379031 Eucalyptus grandis
Eucgr.J02884 1.0kb downstream 1.0kb downstream 1000 false Chr10: 34378032-34379031 Eucalyptus grandis
Eucgr.J02884 2.0kb upstream 2.0kb upstream 3481 true Chr10: 34374551-34378031 Eucalyptus grandis
Eucgr.J02884 2.0kb upstream 2.0kb upstream 2000 false Chr10: 34374551-34376550 Eucalyptus grandis
Eucgr.J02884 2.0kb downstream 2.0kb downstream 3481 true Chr10: 34376551-34380031 Eucalyptus grandis
Eucgr.J02884 2.0kb downstream 2.0kb downstream 2000 false Chr10: 34378032-34380031 Eucalyptus grandis
Eucgr.J02884 5.0kb upstream 5.0kb upstream 6481 true Chr10: 34371551-34378031 Eucalyptus grandis
Eucgr.J02884 5.0kb upstream 5.0kb upstream 5000 false Chr10: 34371551-34376550 Eucalyptus grandis
Eucgr.J02884 5.0kb downstream 5.0kb downstream 6481 true Chr10: 34376551-34383031 Eucalyptus grandis
Eucgr.J02884 5.0kb downstream 5.0kb downstream 5000 false Chr10: 34378032-34383031 Eucalyptus grandis
Eucgr.J02884 10.0kb upstream 10.0kb upstream 11481 true Chr10: 34366551-34378031 Eucalyptus grandis
Eucgr.J02884 10.0kb upstream 10.0kb upstream 10000 false Chr10: 34366551-34376550 Eucalyptus grandis
Eucgr.J02884 10.0kb downstream 10.0kb downstream 11481 true Chr10: 34376551-34388031 Eucalyptus grandis
Eucgr.J02884 10.0kb downstream 10.0kb downstream 10000 false Chr10: 34378032-34388031 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067626 5270 Rosid View MSA
123747887 5271 Pentapetalae View MSA
122788322 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.76885 0.0 11.8857    
cufflinks 9.95388 0.0 23.1842   High
cufflinks 6.86197 0.0 16.5728    
cufflinks 6.59243 0.0 15.9492    
cufflinks 2.50304 0.0 6.67192   Low
cufflinks 8.1081 0.0 19.1107    

0 Strain