Gene : Eucgr.K00408 E. grandis v2.0
Defline:  (1 of 11) KOG3399 - Predicted Yippee-type zinc-binding protein Genomic Order:  321
Name:  ? Eucgr.K00408 Secondary Identifier:  ? PAC:32068317
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00408 0.5kb upstream 0.5kb upstream 2475 true Chr11: 3640109-3642583 Eucalyptus grandis
Eucgr.K00408 0.5kb upstream 0.5kb upstream 500 false Chr11: 3642084-3642583 Eucalyptus grandis
Eucgr.K00408 0.5kb downstream 0.5kb downstream 2475 true Chr11: 3639609-3642083 Eucalyptus grandis
Eucgr.K00408 0.5kb downstream 0.5kb downstream 500 false Chr11: 3639609-3640108 Eucalyptus grandis
Eucgr.K00408 1.0kb upstream 1.0kb upstream 2975 true Chr11: 3640109-3643083 Eucalyptus grandis
Eucgr.K00408 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3642084-3643083 Eucalyptus grandis
Eucgr.K00408 1.0kb downstream 1.0kb downstream 2975 true Chr11: 3639109-3642083 Eucalyptus grandis
Eucgr.K00408 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3639109-3640108 Eucalyptus grandis
Eucgr.K00408 2.0kb upstream 2.0kb upstream 3975 true Chr11: 3640109-3644083 Eucalyptus grandis
Eucgr.K00408 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3642084-3644083 Eucalyptus grandis
Eucgr.K00408 2.0kb downstream 2.0kb downstream 3975 true Chr11: 3638109-3642083 Eucalyptus grandis
Eucgr.K00408 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3638109-3640108 Eucalyptus grandis
Eucgr.K00408 5.0kb upstream 5.0kb upstream 6975 true Chr11: 3640109-3647083 Eucalyptus grandis
Eucgr.K00408 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3642084-3647083 Eucalyptus grandis
Eucgr.K00408 5.0kb downstream 5.0kb downstream 6975 true Chr11: 3635109-3642083 Eucalyptus grandis
Eucgr.K00408 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3635109-3640108 Eucalyptus grandis
Eucgr.K00408 10.0kb upstream 10.0kb upstream 11975 true Chr11: 3640109-3652083 Eucalyptus grandis
Eucgr.K00408 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3642084-3652083 Eucalyptus grandis
Eucgr.K00408 10.0kb downstream 10.0kb downstream 11975 true Chr11: 3630109-3642083 Eucalyptus grandis
Eucgr.K00408 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3630109-3640108 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041337 5273 Angiosperm View MSA
124072414 5270 Rosid View MSA
123752615 5271 Pentapetalae View MSA
122791285 5272 Eudicot View MSA
123428914 5275 Viridiplantae View MSA
121343957 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.5445 0.0 55.7225    
cufflinks 102.238 0.0 230.814 High  
cufflinks 16.9422 0.0 52.0306   Low
cufflinks 80.5389 0.0 220.689 High  
cufflinks 109.275 0.0 296.275 High High
cufflinks 32.649 0.0 90.0128    

0 Strain