Gene : Eucgr.K00425 E. grandis v2.0
Defline:  (1 of 44) PF14009 - Domain of unknown function (DUF4228) (DUF4228) Genomic Order:  336
Name:  ? Eucgr.K00425 Secondary Identifier:  ? PAC:32068593
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00425 0.5kb upstream 0.5kb upstream 1711 true Chr11: 3790568-3792278 Eucalyptus grandis
Eucgr.K00425 0.5kb upstream 0.5kb upstream 500 false Chr11: 3791779-3792278 Eucalyptus grandis
Eucgr.K00425 0.5kb downstream 0.5kb downstream 1711 true Chr11: 3790068-3791778 Eucalyptus grandis
Eucgr.K00425 0.5kb downstream 0.5kb downstream 500 false Chr11: 3790068-3790567 Eucalyptus grandis
Eucgr.K00425 1.0kb upstream 1.0kb upstream 2211 true Chr11: 3790568-3792778 Eucalyptus grandis
Eucgr.K00425 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3791779-3792778 Eucalyptus grandis
Eucgr.K00425 1.0kb downstream 1.0kb downstream 2211 true Chr11: 3789568-3791778 Eucalyptus grandis
Eucgr.K00425 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3789568-3790567 Eucalyptus grandis
Eucgr.K00425 2.0kb upstream 2.0kb upstream 3211 true Chr11: 3790568-3793778 Eucalyptus grandis
Eucgr.K00425 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3791779-3793778 Eucalyptus grandis
Eucgr.K00425 2.0kb downstream 2.0kb downstream 3211 true Chr11: 3788568-3791778 Eucalyptus grandis
Eucgr.K00425 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3788568-3790567 Eucalyptus grandis
Eucgr.K00425 5.0kb upstream 5.0kb upstream 6211 true Chr11: 3790568-3796778 Eucalyptus grandis
Eucgr.K00425 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3791779-3796778 Eucalyptus grandis
Eucgr.K00425 5.0kb downstream 5.0kb downstream 6211 true Chr11: 3785568-3791778 Eucalyptus grandis
Eucgr.K00425 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3785568-3790567 Eucalyptus grandis
Eucgr.K00425 10.0kb upstream 10.0kb upstream 11211 true Chr11: 3790568-3801778 Eucalyptus grandis
Eucgr.K00425 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3791779-3801778 Eucalyptus grandis
Eucgr.K00425 10.0kb downstream 10.0kb downstream 11211 true Chr11: 3780568-3791778 Eucalyptus grandis
Eucgr.K00425 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3780568-3790567 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072985 5270 Rosid View MSA
123742917 5271 Pentapetalae View MSA
122770441 5272 Eudicot View MSA
122049555 5273 Angiosperm View MSA
121311472 5274 Embryophyte View MSA
123348766 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.93852 0.0 15.6747    
cufflinks 13.7114 0.0 32.0704   High
cufflinks 6.83571 0.0 17.5372    
cufflinks 1.03631 0.0 3.50986   Low
cufflinks 4.69486 0.0 13.0072    
cufflinks 3.74983 0.0 10.6003    

0 Strain