Gene : Eucgr.K00398 E. grandis v2.0
Defline:  (1 of 1) PTHR10827:SF54 - CALCIUM-BINDING EF HAND FAMILY PROTEIN Genomic Order:  311
Name:  ? Eucgr.K00398 Secondary Identifier:  ? PAC:32068552
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00398 0.5kb upstream 0.5kb upstream 2334 true Chr11: 3576598-3578931 Eucalyptus grandis
Eucgr.K00398 0.5kb upstream 0.5kb upstream 500 false Chr11: 3578432-3578931 Eucalyptus grandis
Eucgr.K00398 0.5kb downstream 0.5kb downstream 2334 true Chr11: 3576098-3578431 Eucalyptus grandis
Eucgr.K00398 0.5kb downstream 0.5kb downstream 500 false Chr11: 3576098-3576597 Eucalyptus grandis
Eucgr.K00398 1.0kb upstream 1.0kb upstream 2834 true Chr11: 3576598-3579431 Eucalyptus grandis
Eucgr.K00398 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3578432-3579431 Eucalyptus grandis
Eucgr.K00398 1.0kb downstream 1.0kb downstream 2834 true Chr11: 3575598-3578431 Eucalyptus grandis
Eucgr.K00398 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3575598-3576597 Eucalyptus grandis
Eucgr.K00398 2.0kb upstream 2.0kb upstream 3834 true Chr11: 3576598-3580431 Eucalyptus grandis
Eucgr.K00398 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3578432-3580431 Eucalyptus grandis
Eucgr.K00398 2.0kb downstream 2.0kb downstream 3834 true Chr11: 3574598-3578431 Eucalyptus grandis
Eucgr.K00398 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3574598-3576597 Eucalyptus grandis
Eucgr.K00398 5.0kb upstream 5.0kb upstream 6834 true Chr11: 3576598-3583431 Eucalyptus grandis
Eucgr.K00398 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3578432-3583431 Eucalyptus grandis
Eucgr.K00398 5.0kb downstream 5.0kb downstream 6834 true Chr11: 3571598-3578431 Eucalyptus grandis
Eucgr.K00398 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3571598-3576597 Eucalyptus grandis
Eucgr.K00398 10.0kb upstream 10.0kb upstream 11834 true Chr11: 3576598-3588431 Eucalyptus grandis
Eucgr.K00398 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3578432-3588431 Eucalyptus grandis
Eucgr.K00398 10.0kb downstream 10.0kb downstream 11834 true Chr11: 3566598-3578431 Eucalyptus grandis
Eucgr.K00398 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3566598-3576597 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050130 5270 Rosid View MSA
123750102 5271 Pentapetalae View MSA
122788650 5272 Eudicot View MSA
122049125 5273 Angiosperm View MSA
121311258 5274 Embryophyte View MSA
123348573 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain