Gene : Eucgr.K00334 E. grandis v2.0
Defline:  (1 of 2) PTHR10788//PTHR10788:SF39 - TREHALOSE-6-PHOSPHATE SYNTHASE Genomic Order:  260
Name:  ? Eucgr.K00334 Secondary Identifier:  ? PAC:32069246
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00334 0.5kb upstream 0.5kb upstream 3231 true Chr11: 2920290-2923520 Eucalyptus grandis
Eucgr.K00334 0.5kb upstream 0.5kb upstream 500 false Chr11: 2923021-2923520 Eucalyptus grandis
Eucgr.K00334 0.5kb downstream 0.5kb downstream 3231 true Chr11: 2919790-2923020 Eucalyptus grandis
Eucgr.K00334 0.5kb downstream 0.5kb downstream 500 false Chr11: 2919790-2920289 Eucalyptus grandis
Eucgr.K00334 1.0kb upstream 1.0kb upstream 3731 true Chr11: 2920290-2924020 Eucalyptus grandis
Eucgr.K00334 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2923021-2924020 Eucalyptus grandis
Eucgr.K00334 1.0kb downstream 1.0kb downstream 3731 true Chr11: 2919290-2923020 Eucalyptus grandis
Eucgr.K00334 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2919290-2920289 Eucalyptus grandis
Eucgr.K00334 2.0kb upstream 2.0kb upstream 4731 true Chr11: 2920290-2925020 Eucalyptus grandis
Eucgr.K00334 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2923021-2925020 Eucalyptus grandis
Eucgr.K00334 2.0kb downstream 2.0kb downstream 4731 true Chr11: 2918290-2923020 Eucalyptus grandis
Eucgr.K00334 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2918290-2920289 Eucalyptus grandis
Eucgr.K00334 5.0kb upstream 5.0kb upstream 7731 true Chr11: 2920290-2928020 Eucalyptus grandis
Eucgr.K00334 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2923021-2928020 Eucalyptus grandis
Eucgr.K00334 5.0kb downstream 5.0kb downstream 7731 true Chr11: 2915290-2923020 Eucalyptus grandis
Eucgr.K00334 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2915290-2920289 Eucalyptus grandis
Eucgr.K00334 10.0kb upstream 10.0kb upstream 12731 true Chr11: 2920290-2933020 Eucalyptus grandis
Eucgr.K00334 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2923021-2933020 Eucalyptus grandis
Eucgr.K00334 10.0kb downstream 10.0kb downstream 12731 true Chr11: 2910290-2923020 Eucalyptus grandis
Eucgr.K00334 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2910290-2920289 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071032 5270 Rosid View MSA
123748006 5271 Pentapetalae View MSA
122793919 5272 Eudicot View MSA
122048868 5273 Angiosperm View MSA
121311146 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.2923 0.0 36.6371    
cufflinks 48.0825 0.0 106.897 High  
cufflinks 23.4651 0.0 52.074    
cufflinks 37.811 0.0 83.7    
cufflinks 104.318 0.0 240.916 High High
cufflinks 13.6991 0.0 31.1687   Low

0 Strain