Gene : Eucgr.K00316 E. grandis v2.0
Defline:  (1 of 2) PF11341 - Protein of unknown function (DUF3143) (DUF3143) Genomic Order:  243
Name:  ? Eucgr.K00316 Secondary Identifier:  ? PAC:32069142
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00316 0.5kb upstream 0.5kb upstream 2934 true Chr11: 2778641-2781574 Eucalyptus grandis
Eucgr.K00316 0.5kb upstream 0.5kb upstream 500 false Chr11: 2778641-2779140 Eucalyptus grandis
Eucgr.K00316 0.5kb downstream 0.5kb downstream 2934 true Chr11: 2779141-2782074 Eucalyptus grandis
Eucgr.K00316 0.5kb downstream 0.5kb downstream 500 false Chr11: 2781575-2782074 Eucalyptus grandis
Eucgr.K00316 1.0kb upstream 1.0kb upstream 3434 true Chr11: 2778141-2781574 Eucalyptus grandis
Eucgr.K00316 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2778141-2779140 Eucalyptus grandis
Eucgr.K00316 1.0kb downstream 1.0kb downstream 3434 true Chr11: 2779141-2782574 Eucalyptus grandis
Eucgr.K00316 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2781575-2782574 Eucalyptus grandis
Eucgr.K00316 2.0kb upstream 2.0kb upstream 4434 true Chr11: 2777141-2781574 Eucalyptus grandis
Eucgr.K00316 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2777141-2779140 Eucalyptus grandis
Eucgr.K00316 2.0kb downstream 2.0kb downstream 4434 true Chr11: 2779141-2783574 Eucalyptus grandis
Eucgr.K00316 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2781575-2783574 Eucalyptus grandis
Eucgr.K00316 5.0kb upstream 5.0kb upstream 7434 true Chr11: 2774141-2781574 Eucalyptus grandis
Eucgr.K00316 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2774141-2779140 Eucalyptus grandis
Eucgr.K00316 5.0kb downstream 5.0kb downstream 7434 true Chr11: 2779141-2786574 Eucalyptus grandis
Eucgr.K00316 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2781575-2786574 Eucalyptus grandis
Eucgr.K00316 10.0kb upstream 10.0kb upstream 12434 true Chr11: 2769141-2781574 Eucalyptus grandis
Eucgr.K00316 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2769141-2779140 Eucalyptus grandis
Eucgr.K00316 10.0kb downstream 10.0kb downstream 12434 true Chr11: 2779141-2791574 Eucalyptus grandis
Eucgr.K00316 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2781575-2791574 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064012 5270 Rosid View MSA
123737181 5271 Pentapetalae View MSA
122792714 5272 Eudicot View MSA
122044446 5273 Angiosperm View MSA
121347894 5274 Embryophyte View MSA
123380669 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.90561 0.0 10.7753    
cufflinks 9.65012 0.0 24.5015   High
cufflinks 2.69383 0.0 7.7564    
cufflinks 0.658532 0.0 2.26123   Low
cufflinks 1.47383 0.0 4.55864    
cufflinks 7.42519 0.0 19.1161    

0 Strain