Gene : Eucgr.K00275 E. grandis v2.0
Defline:  (1 of 1) PTHR11203:SF5 - CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2 Genomic Order:  207
Name:  ? Eucgr.K00275 Secondary Identifier:  ? PAC:32067730
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00275 0.5kb upstream 0.5kb upstream 8360 true Chr11: 2462823-2471182 Eucalyptus grandis
Eucgr.K00275 0.5kb upstream 0.5kb upstream 500 false Chr11: 2462823-2463322 Eucalyptus grandis
Eucgr.K00275 0.5kb downstream 0.5kb downstream 8360 true Chr11: 2463323-2471682 Eucalyptus grandis
Eucgr.K00275 0.5kb downstream 0.5kb downstream 500 false Chr11: 2471183-2471682 Eucalyptus grandis
Eucgr.K00275 1.0kb upstream 1.0kb upstream 8860 true Chr11: 2462323-2471182 Eucalyptus grandis
Eucgr.K00275 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2462323-2463322 Eucalyptus grandis
Eucgr.K00275 1.0kb downstream 1.0kb downstream 8860 true Chr11: 2463323-2472182 Eucalyptus grandis
Eucgr.K00275 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2471183-2472182 Eucalyptus grandis
Eucgr.K00275 2.0kb upstream 2.0kb upstream 9860 true Chr11: 2461323-2471182 Eucalyptus grandis
Eucgr.K00275 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2461323-2463322 Eucalyptus grandis
Eucgr.K00275 2.0kb downstream 2.0kb downstream 9860 true Chr11: 2463323-2473182 Eucalyptus grandis
Eucgr.K00275 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2471183-2473182 Eucalyptus grandis
Eucgr.K00275 5.0kb upstream 5.0kb upstream 12860 true Chr11: 2458323-2471182 Eucalyptus grandis
Eucgr.K00275 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2458323-2463322 Eucalyptus grandis
Eucgr.K00275 5.0kb downstream 5.0kb downstream 12860 true Chr11: 2463323-2476182 Eucalyptus grandis
Eucgr.K00275 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2471183-2476182 Eucalyptus grandis
Eucgr.K00275 10.0kb upstream 10.0kb upstream 17860 true Chr11: 2453323-2471182 Eucalyptus grandis
Eucgr.K00275 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2453323-2463322 Eucalyptus grandis
Eucgr.K00275 10.0kb downstream 10.0kb downstream 17860 true Chr11: 2463323-2481182 Eucalyptus grandis
Eucgr.K00275 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2471183-2481182 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064457 5270 Rosid View MSA
123738421 5271 Pentapetalae View MSA
122791055 5272 Eudicot View MSA
122046415 5273 Angiosperm View MSA
121346167 5274 Embryophyte View MSA
123425250 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.7378 0.0 32.8988    
cufflinks 6.8604 0.0 15.9532   Low
cufflinks 13.3956 0.0 34.2096    
cufflinks 7.04946 0.0 16.3507   Low
cufflinks 9.21855 0.0 25.4341    
cufflinks 13.9381 0.0 31.4964    

0 Strain