Gene : Eucgr.K00283 E. grandis v2.0
Defline:  (1 of 1) PTHR33162:SF3 - SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATB, CHLOROPLASTIC Genomic Order:  215
Name:  ? Eucgr.K00283 Secondary Identifier:  ? PAC:32068084
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00283 0.5kb upstream 0.5kb upstream 4743 true Chr11: 2526990-2531732 Eucalyptus grandis
Eucgr.K00283 0.5kb upstream 0.5kb upstream 500 false Chr11: 2526990-2527489 Eucalyptus grandis
Eucgr.K00283 0.5kb downstream 0.5kb downstream 4743 true Chr11: 2527490-2532232 Eucalyptus grandis
Eucgr.K00283 0.5kb downstream 0.5kb downstream 500 false Chr11: 2531733-2532232 Eucalyptus grandis
Eucgr.K00283 1.0kb upstream 1.0kb upstream 5243 true Chr11: 2526490-2531732 Eucalyptus grandis
Eucgr.K00283 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2526490-2527489 Eucalyptus grandis
Eucgr.K00283 1.0kb downstream 1.0kb downstream 5243 true Chr11: 2527490-2532732 Eucalyptus grandis
Eucgr.K00283 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2531733-2532732 Eucalyptus grandis
Eucgr.K00283 2.0kb upstream 2.0kb upstream 6243 true Chr11: 2525490-2531732 Eucalyptus grandis
Eucgr.K00283 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2525490-2527489 Eucalyptus grandis
Eucgr.K00283 2.0kb downstream 2.0kb downstream 6243 true Chr11: 2527490-2533732 Eucalyptus grandis
Eucgr.K00283 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2531733-2533732 Eucalyptus grandis
Eucgr.K00283 5.0kb upstream 5.0kb upstream 9243 true Chr11: 2522490-2531732 Eucalyptus grandis
Eucgr.K00283 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2522490-2527489 Eucalyptus grandis
Eucgr.K00283 5.0kb downstream 5.0kb downstream 9243 true Chr11: 2527490-2536732 Eucalyptus grandis
Eucgr.K00283 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2531733-2536732 Eucalyptus grandis
Eucgr.K00283 10.0kb upstream 10.0kb upstream 14243 true Chr11: 2517490-2531732 Eucalyptus grandis
Eucgr.K00283 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2517490-2527489 Eucalyptus grandis
Eucgr.K00283 10.0kb downstream 10.0kb downstream 14243 true Chr11: 2527490-2541732 Eucalyptus grandis
Eucgr.K00283 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2531733-2541732 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041291 5273 Angiosperm View MSA
124064942 5270 Rosid View MSA
123739893 5271 Pentapetalae View MSA
122786242 5272 Eudicot View MSA
121347697 5274 Embryophyte View MSA
123425251 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.8039 0.0 25.0598    
cufflinks 4.46382 0.0 11.5351    
cufflinks 6.14593 0.0 17.3141    
cufflinks 1.75683 0.0 5.08333   Low
cufflinks 1.54538 0.0 4.69759   Low
cufflinks 15.8926 0.0 39.773   High

0 Strain