Gene : Eucgr.K00241 E. grandis v2.0
Defline:  (1 of 1) PTHR12398 - PROTEIN PHOSPHATASE INHIBITOR Genomic Order:  177
Name:  ? Eucgr.K00241 Secondary Identifier:  ? PAC:32067035
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00241 0.5kb upstream 0.5kb upstream 4071 true Chr11: 1958502-1962572 Eucalyptus grandis
Eucgr.K00241 0.5kb upstream 0.5kb upstream 500 false Chr11: 1962073-1962572 Eucalyptus grandis
Eucgr.K00241 0.5kb downstream 0.5kb downstream 4071 true Chr11: 1958002-1962072 Eucalyptus grandis
Eucgr.K00241 0.5kb downstream 0.5kb downstream 500 false Chr11: 1958002-1958501 Eucalyptus grandis
Eucgr.K00241 1.0kb upstream 1.0kb upstream 4571 true Chr11: 1958502-1963072 Eucalyptus grandis
Eucgr.K00241 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1962073-1963072 Eucalyptus grandis
Eucgr.K00241 1.0kb downstream 1.0kb downstream 4571 true Chr11: 1957502-1962072 Eucalyptus grandis
Eucgr.K00241 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1957502-1958501 Eucalyptus grandis
Eucgr.K00241 2.0kb upstream 2.0kb upstream 5571 true Chr11: 1958502-1964072 Eucalyptus grandis
Eucgr.K00241 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1962073-1964072 Eucalyptus grandis
Eucgr.K00241 2.0kb downstream 2.0kb downstream 5571 true Chr11: 1956502-1962072 Eucalyptus grandis
Eucgr.K00241 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1956502-1958501 Eucalyptus grandis
Eucgr.K00241 5.0kb upstream 5.0kb upstream 8571 true Chr11: 1958502-1967072 Eucalyptus grandis
Eucgr.K00241 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1962073-1967072 Eucalyptus grandis
Eucgr.K00241 5.0kb downstream 5.0kb downstream 8571 true Chr11: 1953502-1962072 Eucalyptus grandis
Eucgr.K00241 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1953502-1958501 Eucalyptus grandis
Eucgr.K00241 10.0kb upstream 10.0kb upstream 13571 true Chr11: 1958502-1972072 Eucalyptus grandis
Eucgr.K00241 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1962073-1972072 Eucalyptus grandis
Eucgr.K00241 10.0kb downstream 10.0kb downstream 13571 true Chr11: 1948502-1962072 Eucalyptus grandis
Eucgr.K00241 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1948502-1958501 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061983 5270 Rosid View MSA
123745681 5271 Pentapetalae View MSA
122786905 5272 Eudicot View MSA
122042878 5273 Angiosperm View MSA
121350787 5274 Embryophyte View MSA
123381884 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.4945 0.0 98.9738    
cufflinks 33.4124 0.0 75.152 High  
cufflinks 28.3484 0.0 64.9904 High Low
cufflinks 49.5457 0.0 111.123 High High
cufflinks 34.1974 0.0 76.8469    
cufflinks 46.9016 0.0 116.602 High High

0 Strain