Gene : Eucgr.K00246 E. grandis v2.0
Defline:  (1 of 2) PTHR11081:SF17 - FLAP ENDONUCLEASE GEN-LIKE 2 Genomic Order:  182
Name:  ? Eucgr.K00246 Secondary Identifier:  ? PAC:32068912
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00246 0.5kb upstream 0.5kb upstream 5045 true Chr11: 1988771-1993815 Eucalyptus grandis
Eucgr.K00246 0.5kb upstream 0.5kb upstream 500 false Chr11: 1988771-1989270 Eucalyptus grandis
Eucgr.K00246 0.5kb downstream 0.5kb downstream 5045 true Chr11: 1989271-1994315 Eucalyptus grandis
Eucgr.K00246 0.5kb downstream 0.5kb downstream 500 false Chr11: 1993816-1994315 Eucalyptus grandis
Eucgr.K00246 1.0kb upstream 1.0kb upstream 5545 true Chr11: 1988271-1993815 Eucalyptus grandis
Eucgr.K00246 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1988271-1989270 Eucalyptus grandis
Eucgr.K00246 1.0kb downstream 1.0kb downstream 5545 true Chr11: 1989271-1994815 Eucalyptus grandis
Eucgr.K00246 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1993816-1994815 Eucalyptus grandis
Eucgr.K00246 2.0kb upstream 2.0kb upstream 6545 true Chr11: 1987271-1993815 Eucalyptus grandis
Eucgr.K00246 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1987271-1989270 Eucalyptus grandis
Eucgr.K00246 2.0kb downstream 2.0kb downstream 6545 true Chr11: 1989271-1995815 Eucalyptus grandis
Eucgr.K00246 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1993816-1995815 Eucalyptus grandis
Eucgr.K00246 5.0kb upstream 5.0kb upstream 9545 true Chr11: 1984271-1993815 Eucalyptus grandis
Eucgr.K00246 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1984271-1989270 Eucalyptus grandis
Eucgr.K00246 5.0kb downstream 5.0kb downstream 9545 true Chr11: 1989271-1998815 Eucalyptus grandis
Eucgr.K00246 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1993816-1998815 Eucalyptus grandis
Eucgr.K00246 10.0kb upstream 10.0kb upstream 14545 true Chr11: 1979271-1993815 Eucalyptus grandis
Eucgr.K00246 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1979271-1989270 Eucalyptus grandis
Eucgr.K00246 10.0kb downstream 10.0kb downstream 14545 true Chr11: 1989271-2003815 Eucalyptus grandis
Eucgr.K00246 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1993816-2003815 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068955 5270 Rosid View MSA
123737591 5271 Pentapetalae View MSA
122786802 5272 Eudicot View MSA
122050954 5273 Angiosperm View MSA
121312219 5274 Embryophyte View MSA
123349413 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.562047 0.0 1.74261    
cufflinks 1.32999 0.0 3.71211   High
cufflinks 0.442797 0.0 1.40686    
cufflinks 0.234188 0.0 0.805503 Low  
cufflinks 0.116749 0.0 0.444004 Low  
cufflinks 0.0485188 0.0 0.258878 Low Low

0 Strain