Gene : Eucgr.K00234 E. grandis v2.0
Defline:  (1 of 1) PTHR24326:SF288 - HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG7 Genomic Order:  170
Name:  ? Eucgr.K00234 Secondary Identifier:  ? PAC:32067056
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00234 0.5kb upstream 0.5kb upstream 4587 true Chr11: 1921320-1925906 Eucalyptus grandis
Eucgr.K00234 0.5kb upstream 0.5kb upstream 500 false Chr11: 1921320-1921819 Eucalyptus grandis
Eucgr.K00234 0.5kb downstream 0.5kb downstream 4587 true Chr11: 1921820-1926406 Eucalyptus grandis
Eucgr.K00234 0.5kb downstream 0.5kb downstream 500 false Chr11: 1925907-1926406 Eucalyptus grandis
Eucgr.K00234 1.0kb upstream 1.0kb upstream 5087 true Chr11: 1920820-1925906 Eucalyptus grandis
Eucgr.K00234 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1920820-1921819 Eucalyptus grandis
Eucgr.K00234 1.0kb downstream 1.0kb downstream 5087 true Chr11: 1921820-1926906 Eucalyptus grandis
Eucgr.K00234 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1925907-1926906 Eucalyptus grandis
Eucgr.K00234 2.0kb upstream 2.0kb upstream 6087 true Chr11: 1919820-1925906 Eucalyptus grandis
Eucgr.K00234 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1919820-1921819 Eucalyptus grandis
Eucgr.K00234 2.0kb downstream 2.0kb downstream 6087 true Chr11: 1921820-1927906 Eucalyptus grandis
Eucgr.K00234 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1925907-1927906 Eucalyptus grandis
Eucgr.K00234 5.0kb upstream 5.0kb upstream 9087 true Chr11: 1916820-1925906 Eucalyptus grandis
Eucgr.K00234 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1916820-1921819 Eucalyptus grandis
Eucgr.K00234 5.0kb downstream 5.0kb downstream 9087 true Chr11: 1921820-1930906 Eucalyptus grandis
Eucgr.K00234 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1925907-1930906 Eucalyptus grandis
Eucgr.K00234 10.0kb upstream 10.0kb upstream 14087 true Chr11: 1911820-1925906 Eucalyptus grandis
Eucgr.K00234 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1911820-1921819 Eucalyptus grandis
Eucgr.K00234 10.0kb downstream 10.0kb downstream 14087 true Chr11: 1921820-1935906 Eucalyptus grandis
Eucgr.K00234 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1925907-1935906 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031903 5273 Angiosperm View MSA
124052333 5270 Rosid View MSA
123755961 5271 Pentapetalae View MSA
122777162 5272 Eudicot View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.890844 0.0 2.50056    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.71316 0.0 4.50859    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.276011 0.0 0.887671 Low Low

0 Strain