Gene : Eucgr.K00263 E. grandis v2.0
Defline:  (1 of 1) PTHR23002//PTHR23002:SF73 - ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN Genomic Order:  196
Name:  ? Eucgr.K00263 Secondary Identifier:  ? PAC:32067722
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00263 0.5kb upstream 0.5kb upstream 3732 true Chr11: 2251970-2255701 Eucalyptus grandis
Eucgr.K00263 0.5kb upstream 0.5kb upstream 500 false Chr11: 2255202-2255701 Eucalyptus grandis
Eucgr.K00263 0.5kb downstream 0.5kb downstream 3732 true Chr11: 2251470-2255201 Eucalyptus grandis
Eucgr.K00263 0.5kb downstream 0.5kb downstream 500 false Chr11: 2251470-2251969 Eucalyptus grandis
Eucgr.K00263 1.0kb upstream 1.0kb upstream 4232 true Chr11: 2251970-2256201 Eucalyptus grandis
Eucgr.K00263 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2255202-2256201 Eucalyptus grandis
Eucgr.K00263 1.0kb downstream 1.0kb downstream 4232 true Chr11: 2250970-2255201 Eucalyptus grandis
Eucgr.K00263 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2250970-2251969 Eucalyptus grandis
Eucgr.K00263 2.0kb upstream 2.0kb upstream 5232 true Chr11: 2251970-2257201 Eucalyptus grandis
Eucgr.K00263 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2255202-2257201 Eucalyptus grandis
Eucgr.K00263 2.0kb downstream 2.0kb downstream 5232 true Chr11: 2249970-2255201 Eucalyptus grandis
Eucgr.K00263 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2249970-2251969 Eucalyptus grandis
Eucgr.K00263 5.0kb upstream 5.0kb upstream 8232 true Chr11: 2251970-2260201 Eucalyptus grandis
Eucgr.K00263 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2255202-2260201 Eucalyptus grandis
Eucgr.K00263 5.0kb downstream 5.0kb downstream 8232 true Chr11: 2246970-2255201 Eucalyptus grandis
Eucgr.K00263 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2246970-2251969 Eucalyptus grandis
Eucgr.K00263 10.0kb upstream 10.0kb upstream 13232 true Chr11: 2251970-2265201 Eucalyptus grandis
Eucgr.K00263 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2255202-2265201 Eucalyptus grandis
Eucgr.K00263 10.0kb downstream 10.0kb downstream 13232 true Chr11: 2241970-2255201 Eucalyptus grandis
Eucgr.K00263 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2241970-2251969 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060820 5270 Rosid View MSA
123737113 5271 Pentapetalae View MSA
122794392 5272 Eudicot View MSA
122042446 5273 Angiosperm View MSA
121345577 5274 Embryophyte View MSA
123425385 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.7756 0.0 12.0192    
cufflinks 6.73232 0.0 16.3441   High
cufflinks 4.67587 0.0 11.771    
cufflinks 2.01837 0.0 5.50787   Low
cufflinks 3.8543 0.0 9.87551    
cufflinks 4.0306 0.0 10.3478    

0 Strain