Gene : Eucgr.K00213 E. grandis v2.0
Defline:  (1 of 1) 1.1.1.14 - L-iditol 2-dehydrogenase / Sorbitol dehydrogenase Genomic Order:  153
Name:  ? Eucgr.K00213 Secondary Identifier:  ? PAC:32067874
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-4101 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00213 0.5kb upstream 0.5kb upstream 4259 true Chr11: 1635256-1639514 Eucalyptus grandis
Eucgr.K00213 0.5kb upstream 0.5kb upstream 500 false Chr11: 1635256-1635755 Eucalyptus grandis
Eucgr.K00213 0.5kb downstream 0.5kb downstream 4259 true Chr11: 1635756-1640014 Eucalyptus grandis
Eucgr.K00213 0.5kb downstream 0.5kb downstream 500 false Chr11: 1639515-1640014 Eucalyptus grandis
Eucgr.K00213 1.0kb upstream 1.0kb upstream 4759 true Chr11: 1634756-1639514 Eucalyptus grandis
Eucgr.K00213 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1634756-1635755 Eucalyptus grandis
Eucgr.K00213 1.0kb downstream 1.0kb downstream 4759 true Chr11: 1635756-1640514 Eucalyptus grandis
Eucgr.K00213 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1639515-1640514 Eucalyptus grandis
Eucgr.K00213 2.0kb upstream 2.0kb upstream 5759 true Chr11: 1633756-1639514 Eucalyptus grandis
Eucgr.K00213 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1633756-1635755 Eucalyptus grandis
Eucgr.K00213 2.0kb downstream 2.0kb downstream 5759 true Chr11: 1635756-1641514 Eucalyptus grandis
Eucgr.K00213 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1639515-1641514 Eucalyptus grandis
Eucgr.K00213 5.0kb upstream 5.0kb upstream 8759 true Chr11: 1630756-1639514 Eucalyptus grandis
Eucgr.K00213 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1630756-1635755 Eucalyptus grandis
Eucgr.K00213 5.0kb downstream 5.0kb downstream 8759 true Chr11: 1635756-1644514 Eucalyptus grandis
Eucgr.K00213 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1639515-1644514 Eucalyptus grandis
Eucgr.K00213 10.0kb upstream 10.0kb upstream 13759 true Chr11: 1625756-1639514 Eucalyptus grandis
Eucgr.K00213 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1625756-1635755 Eucalyptus grandis
Eucgr.K00213 10.0kb downstream 10.0kb downstream 13759 true Chr11: 1635756-1649514 Eucalyptus grandis
Eucgr.K00213 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1639515-1649514 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062823 5270 Rosid View MSA
123737718 5271 Pentapetalae View MSA
122797678 5272 Eudicot View MSA
122049435 5273 Angiosperm View MSA
121345697 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.15492 0.0 21.862    
cufflinks 5.33954 0.0 12.6611    
cufflinks 17.4822 0.0 44.5285    
cufflinks 3.0353 0.0 7.7035   Low
cufflinks 14.8222 0.0 33.5454    
cufflinks 82.5707 0.0 223.727 High High

0 Strain