Gene : Eucgr.K00221 E. grandis v2.0
Defline:  (1 of 2) PTHR21530:SF1 - TRAB FAMILY PROTEIN Genomic Order:  159
Name:  ? Eucgr.K00221 Secondary Identifier:  ? PAC:32069540
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00221 0.5kb upstream 0.5kb upstream 3859 true Chr11: 1763379-1767237 Eucalyptus grandis
Eucgr.K00221 0.5kb upstream 0.5kb upstream 500 false Chr11: 1763379-1763878 Eucalyptus grandis
Eucgr.K00221 0.5kb downstream 0.5kb downstream 3859 true Chr11: 1763879-1767737 Eucalyptus grandis
Eucgr.K00221 0.5kb downstream 0.5kb downstream 500 false Chr11: 1767238-1767737 Eucalyptus grandis
Eucgr.K00221 1.0kb upstream 1.0kb upstream 4359 true Chr11: 1762879-1767237 Eucalyptus grandis
Eucgr.K00221 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1762879-1763878 Eucalyptus grandis
Eucgr.K00221 1.0kb downstream 1.0kb downstream 4359 true Chr11: 1763879-1768237 Eucalyptus grandis
Eucgr.K00221 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1767238-1768237 Eucalyptus grandis
Eucgr.K00221 2.0kb upstream 2.0kb upstream 5359 true Chr11: 1761879-1767237 Eucalyptus grandis
Eucgr.K00221 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1761879-1763878 Eucalyptus grandis
Eucgr.K00221 2.0kb downstream 2.0kb downstream 5359 true Chr11: 1763879-1769237 Eucalyptus grandis
Eucgr.K00221 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1767238-1769237 Eucalyptus grandis
Eucgr.K00221 5.0kb upstream 5.0kb upstream 8359 true Chr11: 1758879-1767237 Eucalyptus grandis
Eucgr.K00221 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1758879-1763878 Eucalyptus grandis
Eucgr.K00221 5.0kb downstream 5.0kb downstream 8359 true Chr11: 1763879-1772237 Eucalyptus grandis
Eucgr.K00221 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1767238-1772237 Eucalyptus grandis
Eucgr.K00221 10.0kb upstream 10.0kb upstream 13359 true Chr11: 1753879-1767237 Eucalyptus grandis
Eucgr.K00221 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1753879-1763878 Eucalyptus grandis
Eucgr.K00221 10.0kb downstream 10.0kb downstream 13359 true Chr11: 1763879-1777237 Eucalyptus grandis
Eucgr.K00221 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1767238-1777237 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061808 5270 Rosid View MSA
123740348 5271 Pentapetalae View MSA
122790474 5272 Eudicot View MSA
122042461 5273 Angiosperm View MSA
121350143 5274 Embryophyte View MSA
123427103 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.99938 0.0 22.4931    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.24758 0.0 15.3051    
cufflinks 0.12865 0.0 0.721756 Low Low
cufflinks 0.287831 0.0 1.1909 Low  
cufflinks 13.9948 0.0 32.7635    

0 Strain