Gene : Eucgr.K00177 E. grandis v2.0
Defline:  (1 of 39) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Genomic Order:  118
Name:  ? Eucgr.K00177 Secondary Identifier:  ? PAC:32066641
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00177 0.5kb upstream 0.5kb upstream 2011 true Chr11: 1153587-1155597 Eucalyptus grandis
Eucgr.K00177 0.5kb upstream 0.5kb upstream 500 false Chr11: 1155098-1155597 Eucalyptus grandis
Eucgr.K00177 0.5kb downstream 0.5kb downstream 2011 true Chr11: 1153087-1155097 Eucalyptus grandis
Eucgr.K00177 0.5kb downstream 0.5kb downstream 500 false Chr11: 1153087-1153586 Eucalyptus grandis
Eucgr.K00177 1.0kb upstream 1.0kb upstream 2511 true Chr11: 1153587-1156097 Eucalyptus grandis
Eucgr.K00177 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1155098-1156097 Eucalyptus grandis
Eucgr.K00177 1.0kb downstream 1.0kb downstream 2511 true Chr11: 1152587-1155097 Eucalyptus grandis
Eucgr.K00177 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1152587-1153586 Eucalyptus grandis
Eucgr.K00177 2.0kb upstream 2.0kb upstream 3511 true Chr11: 1153587-1157097 Eucalyptus grandis
Eucgr.K00177 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1155098-1157097 Eucalyptus grandis
Eucgr.K00177 2.0kb downstream 2.0kb downstream 3511 true Chr11: 1151587-1155097 Eucalyptus grandis
Eucgr.K00177 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1151587-1153586 Eucalyptus grandis
Eucgr.K00177 5.0kb upstream 5.0kb upstream 6511 true Chr11: 1153587-1160097 Eucalyptus grandis
Eucgr.K00177 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1155098-1160097 Eucalyptus grandis
Eucgr.K00177 5.0kb downstream 5.0kb downstream 6511 true Chr11: 1148587-1155097 Eucalyptus grandis
Eucgr.K00177 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1148587-1153586 Eucalyptus grandis
Eucgr.K00177 10.0kb upstream 10.0kb upstream 11511 true Chr11: 1153587-1165097 Eucalyptus grandis
Eucgr.K00177 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1155098-1165097 Eucalyptus grandis
Eucgr.K00177 10.0kb downstream 10.0kb downstream 11511 true Chr11: 1143587-1155097 Eucalyptus grandis
Eucgr.K00177 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1143587-1153586 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072515 5270 Rosid View MSA
123741696 5271 Pentapetalae View MSA
122794529 5272 Eudicot View MSA
122049839 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351768 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain