Gene : Eucgr.K00178 E. grandis v2.0
Defline:  (1 of 5) PTHR23500:SF30 - SUGAR TRANSPORT PROTEIN 3 Genomic Order:  119
Name:  ? Eucgr.K00178 Secondary Identifier:  ? PAC:32069691
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00178 0.5kb upstream 0.5kb upstream 2991 true Chr11: 1163302-1166292 Eucalyptus grandis
Eucgr.K00178 0.5kb upstream 0.5kb upstream 500 false Chr11: 1163302-1163801 Eucalyptus grandis
Eucgr.K00178 0.5kb downstream 0.5kb downstream 2991 true Chr11: 1163802-1166792 Eucalyptus grandis
Eucgr.K00178 0.5kb downstream 0.5kb downstream 500 false Chr11: 1166293-1166792 Eucalyptus grandis
Eucgr.K00178 1.0kb upstream 1.0kb upstream 3491 true Chr11: 1162802-1166292 Eucalyptus grandis
Eucgr.K00178 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1162802-1163801 Eucalyptus grandis
Eucgr.K00178 1.0kb downstream 1.0kb downstream 3491 true Chr11: 1163802-1167292 Eucalyptus grandis
Eucgr.K00178 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1166293-1167292 Eucalyptus grandis
Eucgr.K00178 2.0kb upstream 2.0kb upstream 4491 true Chr11: 1161802-1166292 Eucalyptus grandis
Eucgr.K00178 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1161802-1163801 Eucalyptus grandis
Eucgr.K00178 2.0kb downstream 2.0kb downstream 4491 true Chr11: 1163802-1168292 Eucalyptus grandis
Eucgr.K00178 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1166293-1168292 Eucalyptus grandis
Eucgr.K00178 5.0kb upstream 5.0kb upstream 7491 true Chr11: 1158802-1166292 Eucalyptus grandis
Eucgr.K00178 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1158802-1163801 Eucalyptus grandis
Eucgr.K00178 5.0kb downstream 5.0kb downstream 7491 true Chr11: 1163802-1171292 Eucalyptus grandis
Eucgr.K00178 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1166293-1171292 Eucalyptus grandis
Eucgr.K00178 10.0kb upstream 10.0kb upstream 12491 true Chr11: 1153802-1166292 Eucalyptus grandis
Eucgr.K00178 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1153802-1163801 Eucalyptus grandis
Eucgr.K00178 10.0kb downstream 10.0kb downstream 12491 true Chr11: 1163802-1176292 Eucalyptus grandis
Eucgr.K00178 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1166293-1176292 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065824 5270 Rosid View MSA
123742315 5271 Pentapetalae View MSA
122787331 5272 Eudicot View MSA
122051255 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121350723 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.46096 0.0 1.78103 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.222495 0.0 1.00325 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.995487 0.0 3.43486   High

0 Strain