Gene : Eucgr.K00152 E. grandis v2.0
Defline:  (1 of 1) PTHR11804:SF5 - MITOCHONDRIAL INTERMEDIATE PEPTIDASE Genomic Order:  94
Name:  ? Eucgr.K00152 Secondary Identifier:  ? PAC:32068289
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00152 0.5kb upstream 0.5kb upstream 6240 true Chr11: 967570-973809 Eucalyptus grandis
Eucgr.K00152 0.5kb upstream 0.5kb upstream 500 false Chr11: 973310-973809 Eucalyptus grandis
Eucgr.K00152 0.5kb downstream 0.5kb downstream 6240 true Chr11: 967070-973309 Eucalyptus grandis
Eucgr.K00152 0.5kb downstream 0.5kb downstream 500 false Chr11: 967070-967569 Eucalyptus grandis
Eucgr.K00152 1.0kb upstream 1.0kb upstream 6740 true Chr11: 967570-974309 Eucalyptus grandis
Eucgr.K00152 1.0kb upstream 1.0kb upstream 1000 false Chr11: 973310-974309 Eucalyptus grandis
Eucgr.K00152 1.0kb downstream 1.0kb downstream 6740 true Chr11: 966570-973309 Eucalyptus grandis
Eucgr.K00152 1.0kb downstream 1.0kb downstream 1000 false Chr11: 966570-967569 Eucalyptus grandis
Eucgr.K00152 2.0kb upstream 2.0kb upstream 7740 true Chr11: 967570-975309 Eucalyptus grandis
Eucgr.K00152 2.0kb upstream 2.0kb upstream 2000 false Chr11: 973310-975309 Eucalyptus grandis
Eucgr.K00152 2.0kb downstream 2.0kb downstream 7740 true Chr11: 965570-973309 Eucalyptus grandis
Eucgr.K00152 2.0kb downstream 2.0kb downstream 2000 false Chr11: 965570-967569 Eucalyptus grandis
Eucgr.K00152 5.0kb upstream 5.0kb upstream 10740 true Chr11: 967570-978309 Eucalyptus grandis
Eucgr.K00152 5.0kb upstream 5.0kb upstream 5000 false Chr11: 973310-978309 Eucalyptus grandis
Eucgr.K00152 5.0kb downstream 5.0kb downstream 10740 true Chr11: 962570-973309 Eucalyptus grandis
Eucgr.K00152 5.0kb downstream 5.0kb downstream 5000 false Chr11: 962570-967569 Eucalyptus grandis
Eucgr.K00152 10.0kb upstream 10.0kb upstream 15740 true Chr11: 967570-983309 Eucalyptus grandis
Eucgr.K00152 10.0kb upstream 10.0kb upstream 10000 false Chr11: 973310-983309 Eucalyptus grandis
Eucgr.K00152 10.0kb downstream 10.0kb downstream 15740 true Chr11: 957570-973309 Eucalyptus grandis
Eucgr.K00152 10.0kb downstream 10.0kb downstream 10000 false Chr11: 957570-967569 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071882 5270 Rosid View MSA
123740911 5271 Pentapetalae View MSA
122790063 5272 Eudicot View MSA
122047450 5273 Angiosperm View MSA
121347526 5274 Embryophyte View MSA
123424880 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.25012 0.0 18.9588   High
cufflinks 4.34309 0.0 10.4727    
cufflinks 7.72327 0.0 17.7646   High
cufflinks 2.86814 0.0 7.191    
cufflinks 2.02659 0.0 5.28679   Low
cufflinks 4.4574 0.0 10.8926    

0 Strain