Gene : Eucgr.K00155 E. grandis v2.0
Defline:  (1 of 2) PTHR31080:SF19 - PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN Genomic Order:  97
Name:  ? Eucgr.K00155 Secondary Identifier:  ? PAC:32067831
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-1081 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00155 0.5kb upstream 0.5kb upstream 1495 true Chr11: 993561-995055 Eucalyptus grandis
Eucgr.K00155 0.5kb upstream 0.5kb upstream 500 false Chr11: 993561-994060 Eucalyptus grandis
Eucgr.K00155 0.5kb downstream 0.5kb downstream 1495 true Chr11: 994061-995555 Eucalyptus grandis
Eucgr.K00155 0.5kb downstream 0.5kb downstream 500 false Chr11: 995056-995555 Eucalyptus grandis
Eucgr.K00155 1.0kb upstream 1.0kb upstream 1995 true Chr11: 993061-995055 Eucalyptus grandis
Eucgr.K00155 1.0kb upstream 1.0kb upstream 1000 false Chr11: 993061-994060 Eucalyptus grandis
Eucgr.K00155 1.0kb downstream 1.0kb downstream 1995 true Chr11: 994061-996055 Eucalyptus grandis
Eucgr.K00155 1.0kb downstream 1.0kb downstream 1000 false Chr11: 995056-996055 Eucalyptus grandis
Eucgr.K00155 2.0kb upstream 2.0kb upstream 2995 true Chr11: 992061-995055 Eucalyptus grandis
Eucgr.K00155 2.0kb upstream 2.0kb upstream 2000 false Chr11: 992061-994060 Eucalyptus grandis
Eucgr.K00155 2.0kb downstream 2.0kb downstream 2995 true Chr11: 994061-997055 Eucalyptus grandis
Eucgr.K00155 2.0kb downstream 2.0kb downstream 2000 false Chr11: 995056-997055 Eucalyptus grandis
Eucgr.K00155 5.0kb upstream 5.0kb upstream 5995 true Chr11: 989061-995055 Eucalyptus grandis
Eucgr.K00155 5.0kb upstream 5.0kb upstream 5000 false Chr11: 989061-994060 Eucalyptus grandis
Eucgr.K00155 5.0kb downstream 5.0kb downstream 5995 true Chr11: 994061-1000055 Eucalyptus grandis
Eucgr.K00155 5.0kb downstream 5.0kb downstream 5000 false Chr11: 995056-1000055 Eucalyptus grandis
Eucgr.K00155 10.0kb upstream 10.0kb upstream 10995 true Chr11: 984061-995055 Eucalyptus grandis
Eucgr.K00155 10.0kb upstream 10.0kb upstream 10000 false Chr11: 984061-994060 Eucalyptus grandis
Eucgr.K00155 10.0kb downstream 10.0kb downstream 10995 true Chr11: 994061-1005055 Eucalyptus grandis
Eucgr.K00155 10.0kb downstream 10.0kb downstream 10000 false Chr11: 995056-1005055 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061401 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.86013 0.0 5.42289    
cufflinks 0.822682 0.0 2.64859 Low  
cufflinks 1.22089 0.0 3.75264    
cufflinks 0.52267 0.0 1.79471   Low
cufflinks 1.1271 0.0 3.48618    
cufflinks 2.43079 0.0 6.87856   High

0 Strain