Gene : Eucgr.K00141 E. grandis v2.0
Defline:  (1 of 2) PTHR11751:SF411 - AMINOTRANSFERASE ACS10-RELATED Genomic Order:  83
Name:  ? Eucgr.K00141 Secondary Identifier:  ? PAC:32067517
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis ETHYL-PWY Eucalyptus grandis pathologic  
Egrandis PWY-7270 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00141 0.5kb upstream 0.5kb upstream 4069 true Chr11: 891907-895975 Eucalyptus grandis
Eucgr.K00141 0.5kb upstream 0.5kb upstream 500 false Chr11: 891907-892406 Eucalyptus grandis
Eucgr.K00141 0.5kb downstream 0.5kb downstream 4069 true Chr11: 892407-896475 Eucalyptus grandis
Eucgr.K00141 0.5kb downstream 0.5kb downstream 500 false Chr11: 895976-896475 Eucalyptus grandis
Eucgr.K00141 1.0kb upstream 1.0kb upstream 4569 true Chr11: 891407-895975 Eucalyptus grandis
Eucgr.K00141 1.0kb upstream 1.0kb upstream 1000 false Chr11: 891407-892406 Eucalyptus grandis
Eucgr.K00141 1.0kb downstream 1.0kb downstream 4569 true Chr11: 892407-896975 Eucalyptus grandis
Eucgr.K00141 1.0kb downstream 1.0kb downstream 1000 false Chr11: 895976-896975 Eucalyptus grandis
Eucgr.K00141 2.0kb upstream 2.0kb upstream 5569 true Chr11: 890407-895975 Eucalyptus grandis
Eucgr.K00141 2.0kb upstream 2.0kb upstream 2000 false Chr11: 890407-892406 Eucalyptus grandis
Eucgr.K00141 2.0kb downstream 2.0kb downstream 5569 true Chr11: 892407-897975 Eucalyptus grandis
Eucgr.K00141 2.0kb downstream 2.0kb downstream 2000 false Chr11: 895976-897975 Eucalyptus grandis
Eucgr.K00141 5.0kb upstream 5.0kb upstream 8569 true Chr11: 887407-895975 Eucalyptus grandis
Eucgr.K00141 5.0kb upstream 5.0kb upstream 5000 false Chr11: 887407-892406 Eucalyptus grandis
Eucgr.K00141 5.0kb downstream 5.0kb downstream 8569 true Chr11: 892407-900975 Eucalyptus grandis
Eucgr.K00141 5.0kb downstream 5.0kb downstream 5000 false Chr11: 895976-900975 Eucalyptus grandis
Eucgr.K00141 10.0kb upstream 10.0kb upstream 13569 true Chr11: 882407-895975 Eucalyptus grandis
Eucgr.K00141 10.0kb upstream 10.0kb upstream 10000 false Chr11: 882407-892406 Eucalyptus grandis
Eucgr.K00141 10.0kb downstream 10.0kb downstream 13569 true Chr11: 892407-905975 Eucalyptus grandis
Eucgr.K00141 10.0kb downstream 10.0kb downstream 10000 false Chr11: 895976-905975 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060973 5270 Rosid View MSA
123749397 5271 Pentapetalae View MSA
122792167 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.02666 0.0 6.08101    
cufflinks 3.83478 0.0 12.2185    
cufflinks 2.31946 0.0 6.84258    
cufflinks 1.35229 0.0 4.43784   Low
cufflinks 3.38411 0.0 9.65137    
cufflinks 5.00647 0.0 13.1028   High

0 Strain