Gene : Eucgr.K00133 E. grandis v2.0
Defline:  (1 of 1) 2.7.1.138 - Ceramide kinase / Acylsphingosine kinase Genomic Order:  75
Name:  ? Eucgr.K00133 Secondary Identifier:  ? PAC:32067226
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5129 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00133 0.5kb upstream 0.5kb upstream 6021 true Chr11: 838714-844734 Eucalyptus grandis
Eucgr.K00133 0.5kb upstream 0.5kb upstream 500 false Chr11: 844235-844734 Eucalyptus grandis
Eucgr.K00133 0.5kb downstream 0.5kb downstream 6021 true Chr11: 838214-844234 Eucalyptus grandis
Eucgr.K00133 0.5kb downstream 0.5kb downstream 500 false Chr11: 838214-838713 Eucalyptus grandis
Eucgr.K00133 1.0kb upstream 1.0kb upstream 6521 true Chr11: 838714-845234 Eucalyptus grandis
Eucgr.K00133 1.0kb upstream 1.0kb upstream 1000 false Chr11: 844235-845234 Eucalyptus grandis
Eucgr.K00133 1.0kb downstream 1.0kb downstream 6521 true Chr11: 837714-844234 Eucalyptus grandis
Eucgr.K00133 1.0kb downstream 1.0kb downstream 1000 false Chr11: 837714-838713 Eucalyptus grandis
Eucgr.K00133 2.0kb upstream 2.0kb upstream 7521 true Chr11: 838714-846234 Eucalyptus grandis
Eucgr.K00133 2.0kb upstream 2.0kb upstream 2000 false Chr11: 844235-846234 Eucalyptus grandis
Eucgr.K00133 2.0kb downstream 2.0kb downstream 7521 true Chr11: 836714-844234 Eucalyptus grandis
Eucgr.K00133 2.0kb downstream 2.0kb downstream 2000 false Chr11: 836714-838713 Eucalyptus grandis
Eucgr.K00133 5.0kb upstream 5.0kb upstream 10521 true Chr11: 838714-849234 Eucalyptus grandis
Eucgr.K00133 5.0kb upstream 5.0kb upstream 5000 false Chr11: 844235-849234 Eucalyptus grandis
Eucgr.K00133 5.0kb downstream 5.0kb downstream 10521 true Chr11: 833714-844234 Eucalyptus grandis
Eucgr.K00133 5.0kb downstream 5.0kb downstream 5000 false Chr11: 833714-838713 Eucalyptus grandis
Eucgr.K00133 10.0kb upstream 10.0kb upstream 15521 true Chr11: 838714-854234 Eucalyptus grandis
Eucgr.K00133 10.0kb upstream 10.0kb upstream 10000 false Chr11: 844235-854234 Eucalyptus grandis
Eucgr.K00133 10.0kb downstream 10.0kb downstream 15521 true Chr11: 828714-844234 Eucalyptus grandis
Eucgr.K00133 10.0kb downstream 10.0kb downstream 10000 false Chr11: 828714-838713 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066629 5270 Rosid View MSA
123746434 5271 Pentapetalae View MSA
122791324 5272 Eudicot View MSA
122045057 5273 Angiosperm View MSA
121345163 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.12792 0.0 23.857    
cufflinks 8.24554 0.0 19.6981    
cufflinks 9.31002 0.0 21.7758    
cufflinks 13.8204 0.0 31.1488   High
cufflinks 5.57646 0.0 13.1028   Low
cufflinks 12.2996 0.0 28.2686    

0 Strain