Gene : Eucgr.K00107 E. grandis v2.0
Defline:  (1 of 1) PTHR13275 - YL-1 PROTEIN TRANSCRIPTION FACTOR-LIKE 1 Genomic Order:  51
Name:  ? Eucgr.K00107 Secondary Identifier:  ? PAC:32067008
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00107 0.5kb upstream 0.5kb upstream 5843 true Chr11: 676509-682351 Eucalyptus grandis
Eucgr.K00107 0.5kb upstream 0.5kb upstream 500 false Chr11: 681852-682351 Eucalyptus grandis
Eucgr.K00107 0.5kb downstream 0.5kb downstream 5843 true Chr11: 676009-681851 Eucalyptus grandis
Eucgr.K00107 0.5kb downstream 0.5kb downstream 500 false Chr11: 676009-676508 Eucalyptus grandis
Eucgr.K00107 1.0kb upstream 1.0kb upstream 6343 true Chr11: 676509-682851 Eucalyptus grandis
Eucgr.K00107 1.0kb upstream 1.0kb upstream 1000 false Chr11: 681852-682851 Eucalyptus grandis
Eucgr.K00107 1.0kb downstream 1.0kb downstream 6343 true Chr11: 675509-681851 Eucalyptus grandis
Eucgr.K00107 1.0kb downstream 1.0kb downstream 1000 false Chr11: 675509-676508 Eucalyptus grandis
Eucgr.K00107 2.0kb upstream 2.0kb upstream 7343 true Chr11: 676509-683851 Eucalyptus grandis
Eucgr.K00107 2.0kb upstream 2.0kb upstream 2000 false Chr11: 681852-683851 Eucalyptus grandis
Eucgr.K00107 2.0kb downstream 2.0kb downstream 7343 true Chr11: 674509-681851 Eucalyptus grandis
Eucgr.K00107 2.0kb downstream 2.0kb downstream 2000 false Chr11: 674509-676508 Eucalyptus grandis
Eucgr.K00107 5.0kb upstream 5.0kb upstream 10343 true Chr11: 676509-686851 Eucalyptus grandis
Eucgr.K00107 5.0kb upstream 5.0kb upstream 5000 false Chr11: 681852-686851 Eucalyptus grandis
Eucgr.K00107 5.0kb downstream 5.0kb downstream 10343 true Chr11: 671509-681851 Eucalyptus grandis
Eucgr.K00107 5.0kb downstream 5.0kb downstream 5000 false Chr11: 671509-676508 Eucalyptus grandis
Eucgr.K00107 10.0kb upstream 10.0kb upstream 15343 true Chr11: 676509-691851 Eucalyptus grandis
Eucgr.K00107 10.0kb upstream 10.0kb upstream 10000 false Chr11: 681852-691851 Eucalyptus grandis
Eucgr.K00107 10.0kb downstream 10.0kb downstream 15343 true Chr11: 666509-681851 Eucalyptus grandis
Eucgr.K00107 10.0kb downstream 10.0kb downstream 10000 false Chr11: 666509-676508 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060580 5270 Rosid View MSA
123736798 5271 Pentapetalae View MSA
122788024 5272 Eudicot View MSA
122046393 5273 Angiosperm View MSA
121347831 5274 Embryophyte View MSA
123424205 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.84859 0.0 18.9692    
cufflinks 3.05511 0.0 7.80457   Low
cufflinks 7.97642 0.0 19.2008    
cufflinks 3.42026 0.0 9.92451   Low
cufflinks 10.8709 0.0 25.0986   High
cufflinks 6.77837 0.0 15.7234    

0 Strain