Gene : Eucgr.K00066 E. grandis v2.0
Defline:  (1 of 4) PTHR10857:SF26 - PROTEIN BONZAI 3 Genomic Order:  10
Name:  ? Eucgr.K00066 Secondary Identifier:  ? PAC:32067628
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00066 0.5kb upstream 0.5kb upstream 8358 true Chr11: 405352-413709 Eucalyptus grandis
Eucgr.K00066 0.5kb upstream 0.5kb upstream 500 false Chr11: 413210-413709 Eucalyptus grandis
Eucgr.K00066 0.5kb downstream 0.5kb downstream 8358 true Chr11: 404852-413209 Eucalyptus grandis
Eucgr.K00066 0.5kb downstream 0.5kb downstream 500 false Chr11: 404852-405351 Eucalyptus grandis
Eucgr.K00066 1.0kb upstream 1.0kb upstream 8858 true Chr11: 405352-414209 Eucalyptus grandis
Eucgr.K00066 1.0kb upstream 1.0kb upstream 1000 false Chr11: 413210-414209 Eucalyptus grandis
Eucgr.K00066 1.0kb downstream 1.0kb downstream 8858 true Chr11: 404352-413209 Eucalyptus grandis
Eucgr.K00066 1.0kb downstream 1.0kb downstream 1000 false Chr11: 404352-405351 Eucalyptus grandis
Eucgr.K00066 2.0kb upstream 2.0kb upstream 9858 true Chr11: 405352-415209 Eucalyptus grandis
Eucgr.K00066 2.0kb upstream 2.0kb upstream 2000 false Chr11: 413210-415209 Eucalyptus grandis
Eucgr.K00066 2.0kb downstream 2.0kb downstream 9858 true Chr11: 403352-413209 Eucalyptus grandis
Eucgr.K00066 2.0kb downstream 2.0kb downstream 2000 false Chr11: 403352-405351 Eucalyptus grandis
Eucgr.K00066 5.0kb upstream 5.0kb upstream 12858 true Chr11: 405352-418209 Eucalyptus grandis
Eucgr.K00066 5.0kb upstream 5.0kb upstream 5000 false Chr11: 413210-418209 Eucalyptus grandis
Eucgr.K00066 5.0kb downstream 5.0kb downstream 12858 true Chr11: 400352-413209 Eucalyptus grandis
Eucgr.K00066 5.0kb downstream 5.0kb downstream 5000 false Chr11: 400352-405351 Eucalyptus grandis
Eucgr.K00066 10.0kb upstream 10.0kb upstream 17858 true Chr11: 405352-423209 Eucalyptus grandis
Eucgr.K00066 10.0kb upstream 10.0kb upstream 10000 false Chr11: 413210-423209 Eucalyptus grandis
Eucgr.K00066 10.0kb downstream 10.0kb downstream 17858 true Chr11: 395352-413209 Eucalyptus grandis
Eucgr.K00066 10.0kb downstream 10.0kb downstream 10000 false Chr11: 395352-405351 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064124 5270 Rosid View MSA
123745064 5271 Pentapetalae View MSA
122788484 5272 Eudicot View MSA
122043843 5273 Angiosperm View MSA
121351001 5274 Embryophyte View MSA
123424570 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.3393 0.0 53.5858    
cufflinks 24.2408 0.0 55.2472    
cufflinks 15.8059 0.0 39.5345    
cufflinks 41.7204 0.0 110.639 High High
cufflinks 30.4115 0.0 73.5962    
cufflinks 7.66047 0.0 20.207   Low

0 Strain