Gene : Eucgr.K00934 E. grandis v2.0
Defline:  (1 of 3) 6.1.1.1 - Tyrosine--tRNA ligase / Tyrosyl-tRNA synthetase Genomic Order:  784
Name:  ? Eucgr.K00934 Secondary Identifier:  ? PAC:32068628
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis TRNA-CHARGING-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00934 0.5kb upstream 0.5kb upstream 4506 true Chr11: 11614254-11618759 Eucalyptus grandis
Eucgr.K00934 0.5kb upstream 0.5kb upstream 500 false Chr11: 11614254-11614753 Eucalyptus grandis
Eucgr.K00934 0.5kb downstream 0.5kb downstream 4506 true Chr11: 11614754-11619259 Eucalyptus grandis
Eucgr.K00934 0.5kb downstream 0.5kb downstream 500 false Chr11: 11618760-11619259 Eucalyptus grandis
Eucgr.K00934 1.0kb upstream 1.0kb upstream 5006 true Chr11: 11613754-11618759 Eucalyptus grandis
Eucgr.K00934 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11613754-11614753 Eucalyptus grandis
Eucgr.K00934 1.0kb downstream 1.0kb downstream 5006 true Chr11: 11614754-11619759 Eucalyptus grandis
Eucgr.K00934 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11618760-11619759 Eucalyptus grandis
Eucgr.K00934 2.0kb upstream 2.0kb upstream 6006 true Chr11: 11612754-11618759 Eucalyptus grandis
Eucgr.K00934 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11612754-11614753 Eucalyptus grandis
Eucgr.K00934 2.0kb downstream 2.0kb downstream 6006 true Chr11: 11614754-11620759 Eucalyptus grandis
Eucgr.K00934 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11618760-11620759 Eucalyptus grandis
Eucgr.K00934 5.0kb upstream 5.0kb upstream 9006 true Chr11: 11609754-11618759 Eucalyptus grandis
Eucgr.K00934 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11609754-11614753 Eucalyptus grandis
Eucgr.K00934 5.0kb downstream 5.0kb downstream 9006 true Chr11: 11614754-11623759 Eucalyptus grandis
Eucgr.K00934 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11618760-11623759 Eucalyptus grandis
Eucgr.K00934 10.0kb upstream 10.0kb upstream 14006 true Chr11: 11604754-11618759 Eucalyptus grandis
Eucgr.K00934 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11604754-11614753 Eucalyptus grandis
Eucgr.K00934 10.0kb downstream 10.0kb downstream 14006 true Chr11: 11614754-11628759 Eucalyptus grandis
Eucgr.K00934 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11618760-11628759 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041140 5273 Angiosperm View MSA
124067853 5270 Rosid View MSA
123747436 5271 Pentapetalae View MSA
122790144 5272 Eudicot View MSA
121344192 5274 Embryophyte View MSA
123424631 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.4278 0.0 36.7102    
cufflinks 16.0347 0.0 35.8071    
cufflinks 14.5416 0.0 32.6268    
cufflinks 16.6019 0.0 37.0256   High
cufflinks 14.5719 0.0 32.6778    
cufflinks 14.0273 0.0 31.6081   Low

0 Strain