Gene : Eucgr.K00936 E. grandis v2.0
Defline:  (1 of 3) 2.1.2.5 - Glutamate formimidoyltransferase / Glutamate formyltransferase Genomic Order:  786
Name:  ? Eucgr.K00936 Secondary Identifier:  ? PAC:32066551
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-3841 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00936 0.5kb upstream 0.5kb upstream 1957 true Chr11: 11623276-11625232 Eucalyptus grandis
Eucgr.K00936 0.5kb upstream 0.5kb upstream 500 false Chr11: 11623276-11623775 Eucalyptus grandis
Eucgr.K00936 0.5kb downstream 0.5kb downstream 1957 true Chr11: 11623776-11625732 Eucalyptus grandis
Eucgr.K00936 0.5kb downstream 0.5kb downstream 500 false Chr11: 11625233-11625732 Eucalyptus grandis
Eucgr.K00936 1.0kb upstream 1.0kb upstream 2457 true Chr11: 11622776-11625232 Eucalyptus grandis
Eucgr.K00936 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11622776-11623775 Eucalyptus grandis
Eucgr.K00936 1.0kb downstream 1.0kb downstream 2457 true Chr11: 11623776-11626232 Eucalyptus grandis
Eucgr.K00936 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11625233-11626232 Eucalyptus grandis
Eucgr.K00936 2.0kb upstream 2.0kb upstream 3457 true Chr11: 11621776-11625232 Eucalyptus grandis
Eucgr.K00936 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11621776-11623775 Eucalyptus grandis
Eucgr.K00936 2.0kb downstream 2.0kb downstream 3457 true Chr11: 11623776-11627232 Eucalyptus grandis
Eucgr.K00936 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11625233-11627232 Eucalyptus grandis
Eucgr.K00936 5.0kb upstream 5.0kb upstream 6457 true Chr11: 11618776-11625232 Eucalyptus grandis
Eucgr.K00936 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11618776-11623775 Eucalyptus grandis
Eucgr.K00936 5.0kb downstream 5.0kb downstream 6457 true Chr11: 11623776-11630232 Eucalyptus grandis
Eucgr.K00936 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11625233-11630232 Eucalyptus grandis
Eucgr.K00936 10.0kb upstream 10.0kb upstream 11457 true Chr11: 11613776-11625232 Eucalyptus grandis
Eucgr.K00936 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11613776-11623775 Eucalyptus grandis
Eucgr.K00936 10.0kb downstream 10.0kb downstream 11457 true Chr11: 11623776-11635232 Eucalyptus grandis
Eucgr.K00936 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11625233-11635232 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070892 5270 Rosid View MSA
123745948 5271 Pentapetalae View MSA
122795317 5272 Eudicot View MSA
122048049 5273 Angiosperm View MSA
121344000 5274 Embryophyte View MSA
123424939 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.46105 0.0 13.9695    
cufflinks 0.782309 0.0 2.43362 Low Low
cufflinks 6.39015 0.0 16.0591    
cufflinks 2.971 0.0 8.0205    
cufflinks 3.00232 0.0 8.10807    
cufflinks 18.8129 0.0 43.109   High

0 Strain