Gene : Eucgr.K00946 E. grandis v2.0
Defline:  (1 of 1) PTHR13832:SF193 - PROTEIN PHOSPHATASE 2C 1-RELATED Genomic Order:  796
Name:  ? Eucgr.K00946 Secondary Identifier:  ? PAC:32068471
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00946 0.5kb upstream 0.5kb upstream 5481 true Chr11: 11683975-11689455 Eucalyptus grandis
Eucgr.K00946 0.5kb upstream 0.5kb upstream 500 false Chr11: 11688956-11689455 Eucalyptus grandis
Eucgr.K00946 0.5kb downstream 0.5kb downstream 5481 true Chr11: 11683475-11688955 Eucalyptus grandis
Eucgr.K00946 0.5kb downstream 0.5kb downstream 500 false Chr11: 11683475-11683974 Eucalyptus grandis
Eucgr.K00946 1.0kb upstream 1.0kb upstream 5981 true Chr11: 11683975-11689955 Eucalyptus grandis
Eucgr.K00946 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11688956-11689955 Eucalyptus grandis
Eucgr.K00946 1.0kb downstream 1.0kb downstream 5981 true Chr11: 11682975-11688955 Eucalyptus grandis
Eucgr.K00946 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11682975-11683974 Eucalyptus grandis
Eucgr.K00946 2.0kb upstream 2.0kb upstream 6981 true Chr11: 11683975-11690955 Eucalyptus grandis
Eucgr.K00946 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11688956-11690955 Eucalyptus grandis
Eucgr.K00946 2.0kb downstream 2.0kb downstream 6981 true Chr11: 11681975-11688955 Eucalyptus grandis
Eucgr.K00946 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11681975-11683974 Eucalyptus grandis
Eucgr.K00946 5.0kb upstream 5.0kb upstream 9981 true Chr11: 11683975-11693955 Eucalyptus grandis
Eucgr.K00946 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11688956-11693955 Eucalyptus grandis
Eucgr.K00946 5.0kb downstream 5.0kb downstream 9981 true Chr11: 11678975-11688955 Eucalyptus grandis
Eucgr.K00946 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11678975-11683974 Eucalyptus grandis
Eucgr.K00946 10.0kb upstream 10.0kb upstream 14981 true Chr11: 11683975-11698955 Eucalyptus grandis
Eucgr.K00946 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11688956-11698955 Eucalyptus grandis
Eucgr.K00946 10.0kb downstream 10.0kb downstream 14981 true Chr11: 11673975-11688955 Eucalyptus grandis
Eucgr.K00946 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11673975-11683974 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027541 5273 Angiosperm View MSA
124064580 5270 Rosid View MSA
123739469 5271 Pentapetalae View MSA
122786449 5272 Eudicot View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.3357 0.0 115.522 High  
cufflinks 17.0894 0.0 37.9005   Low
cufflinks 44.2144 0.0 98.9844 High  
cufflinks 26.7591 0.0 59.2225    
cufflinks 30.2419 0.0 67.0013    
cufflinks 57.8504 0.0 130.634 High High

0 Strain