Gene : Eucgr.K00874 E. grandis v2.0
Defline:  (1 of 28) PF03000 - NPH3 family (NPH3) Genomic Order:  731
Name:  ? Eucgr.K00874 Secondary Identifier:  ? PAC:32068594
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00874 0.5kb upstream 0.5kb upstream 3668 true Chr11: 11000445-11004112 Eucalyptus grandis
Eucgr.K00874 0.5kb upstream 0.5kb upstream 500 false Chr11: 11000445-11000944 Eucalyptus grandis
Eucgr.K00874 0.5kb downstream 0.5kb downstream 3668 true Chr11: 11000945-11004612 Eucalyptus grandis
Eucgr.K00874 0.5kb downstream 0.5kb downstream 500 false Chr11: 11004113-11004612 Eucalyptus grandis
Eucgr.K00874 1.0kb upstream 1.0kb upstream 4168 true Chr11: 10999945-11004112 Eucalyptus grandis
Eucgr.K00874 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10999945-11000944 Eucalyptus grandis
Eucgr.K00874 1.0kb downstream 1.0kb downstream 4168 true Chr11: 11000945-11005112 Eucalyptus grandis
Eucgr.K00874 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11004113-11005112 Eucalyptus grandis
Eucgr.K00874 2.0kb upstream 2.0kb upstream 5168 true Chr11: 10998945-11004112 Eucalyptus grandis
Eucgr.K00874 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10998945-11000944 Eucalyptus grandis
Eucgr.K00874 2.0kb downstream 2.0kb downstream 5168 true Chr11: 11000945-11006112 Eucalyptus grandis
Eucgr.K00874 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11004113-11006112 Eucalyptus grandis
Eucgr.K00874 5.0kb upstream 5.0kb upstream 8168 true Chr11: 10995945-11004112 Eucalyptus grandis
Eucgr.K00874 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10995945-11000944 Eucalyptus grandis
Eucgr.K00874 5.0kb downstream 5.0kb downstream 8168 true Chr11: 11000945-11009112 Eucalyptus grandis
Eucgr.K00874 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11004113-11009112 Eucalyptus grandis
Eucgr.K00874 10.0kb upstream 10.0kb upstream 13168 true Chr11: 10990945-11004112 Eucalyptus grandis
Eucgr.K00874 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10990945-11000944 Eucalyptus grandis
Eucgr.K00874 10.0kb downstream 10.0kb downstream 13168 true Chr11: 11000945-11014112 Eucalyptus grandis
Eucgr.K00874 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11004113-11014112 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069355 5270 Rosid View MSA
123750783 5271 Pentapetalae View MSA
122794459 5272 Eudicot View MSA
122048386 5273 Angiosperm View MSA
121349864 5274 Embryophyte View MSA
123381475 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.43085 0.0 6.39952    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.27527 0.0 3.56793   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.00771 0.0 7.81538    

0 Strain