Gene : Eucgr.K00861 E. grandis v2.0
Defline:  (1 of 2) PTHR34126:SF1 - PEROXISOME BIOGENESIS PROTEIN 22 Genomic Order:  723
Name:  ? Eucgr.K00861 Secondary Identifier:  ? PAC:32068532
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00861 0.5kb upstream 0.5kb upstream 5554 true Chr11: 10911292-10916845 Eucalyptus grandis
Eucgr.K00861 0.5kb upstream 0.5kb upstream 500 false Chr11: 10916346-10916845 Eucalyptus grandis
Eucgr.K00861 0.5kb downstream 0.5kb downstream 5554 true Chr11: 10910792-10916345 Eucalyptus grandis
Eucgr.K00861 0.5kb downstream 0.5kb downstream 500 false Chr11: 10910792-10911291 Eucalyptus grandis
Eucgr.K00861 1.0kb upstream 1.0kb upstream 6054 true Chr11: 10911292-10917345 Eucalyptus grandis
Eucgr.K00861 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10916346-10917345 Eucalyptus grandis
Eucgr.K00861 1.0kb downstream 1.0kb downstream 6054 true Chr11: 10910292-10916345 Eucalyptus grandis
Eucgr.K00861 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10910292-10911291 Eucalyptus grandis
Eucgr.K00861 2.0kb upstream 2.0kb upstream 7054 true Chr11: 10911292-10918345 Eucalyptus grandis
Eucgr.K00861 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10916346-10918345 Eucalyptus grandis
Eucgr.K00861 2.0kb downstream 2.0kb downstream 7054 true Chr11: 10909292-10916345 Eucalyptus grandis
Eucgr.K00861 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10909292-10911291 Eucalyptus grandis
Eucgr.K00861 5.0kb upstream 5.0kb upstream 10054 true Chr11: 10911292-10921345 Eucalyptus grandis
Eucgr.K00861 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10916346-10921345 Eucalyptus grandis
Eucgr.K00861 5.0kb downstream 5.0kb downstream 10054 true Chr11: 10906292-10916345 Eucalyptus grandis
Eucgr.K00861 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10906292-10911291 Eucalyptus grandis
Eucgr.K00861 10.0kb upstream 10.0kb upstream 15054 true Chr11: 10911292-10926345 Eucalyptus grandis
Eucgr.K00861 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10916346-10926345 Eucalyptus grandis
Eucgr.K00861 10.0kb downstream 10.0kb downstream 15054 true Chr11: 10901292-10916345 Eucalyptus grandis
Eucgr.K00861 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10901292-10911291 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068410 5270 Rosid View MSA
123738995 5271 Pentapetalae View MSA
122796111 5272 Eudicot View MSA
122047341 5273 Angiosperm View MSA
121350809 5274 Embryophyte View MSA
123425554 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 55.4329 0.0 127.503 High  
cufflinks 67.527 0.0 157.919 High  
cufflinks 57.0457 0.0 173.368 High  
cufflinks 95.6887 0.0 324.126 High High
cufflinks 64.6892 0.0 150.404 High  
cufflinks 54.6006 0.0 125.014 High  

0 Strain