Gene : Eucgr.K00883 E. grandis v2.0
Defline:  (1 of 1) PTHR31062:SF11 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 9 Genomic Order:  740
Name:  ? Eucgr.K00883 Secondary Identifier:  ? PAC:32069630
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00883 0.5kb upstream 0.5kb upstream 2994 true Chr11: 11158219-11161212 Eucalyptus grandis
Eucgr.K00883 0.5kb upstream 0.5kb upstream 500 false Chr11: 11158219-11158718 Eucalyptus grandis
Eucgr.K00883 0.5kb downstream 0.5kb downstream 2994 true Chr11: 11158719-11161712 Eucalyptus grandis
Eucgr.K00883 0.5kb downstream 0.5kb downstream 500 false Chr11: 11161213-11161712 Eucalyptus grandis
Eucgr.K00883 1.0kb upstream 1.0kb upstream 3494 true Chr11: 11157719-11161212 Eucalyptus grandis
Eucgr.K00883 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11157719-11158718 Eucalyptus grandis
Eucgr.K00883 1.0kb downstream 1.0kb downstream 3494 true Chr11: 11158719-11162212 Eucalyptus grandis
Eucgr.K00883 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11161213-11162212 Eucalyptus grandis
Eucgr.K00883 2.0kb upstream 2.0kb upstream 4494 true Chr11: 11156719-11161212 Eucalyptus grandis
Eucgr.K00883 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11156719-11158718 Eucalyptus grandis
Eucgr.K00883 2.0kb downstream 2.0kb downstream 4494 true Chr11: 11158719-11163212 Eucalyptus grandis
Eucgr.K00883 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11161213-11163212 Eucalyptus grandis
Eucgr.K00883 5.0kb upstream 5.0kb upstream 7494 true Chr11: 11153719-11161212 Eucalyptus grandis
Eucgr.K00883 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11153719-11158718 Eucalyptus grandis
Eucgr.K00883 5.0kb downstream 5.0kb downstream 7494 true Chr11: 11158719-11166212 Eucalyptus grandis
Eucgr.K00883 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11161213-11166212 Eucalyptus grandis
Eucgr.K00883 10.0kb upstream 10.0kb upstream 12494 true Chr11: 11148719-11161212 Eucalyptus grandis
Eucgr.K00883 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11148719-11158718 Eucalyptus grandis
Eucgr.K00883 10.0kb downstream 10.0kb downstream 12494 true Chr11: 11158719-11171212 Eucalyptus grandis
Eucgr.K00883 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11161213-11171212 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074045 5270 Rosid View MSA
123744569 5271 Pentapetalae View MSA
122789262 5272 Eudicot View MSA
122045078 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 140.041 0.0 367.21 High  
cufflinks 170.227 0.0 451.432 High  
cufflinks 86.7802 0.0 215.167 High  
cufflinks 190.804 0.0 517.98 High  
cufflinks 265.566 0.0 702.606 High  
cufflinks 6.27001 0.0 15.8058   Low

0 Strain