Gene : Eucgr.K00781 E. grandis v2.0
Defline:  (1 of 4) PTHR13301:SF53 - CELLULOSE SYNTHASE-LIKE PROTEIN B1-RELATED Genomic Order:  662
Name:  ? Eucgr.K00781 Secondary Identifier:  ? PAC:32068056
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-1001 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00781 0.5kb upstream 0.5kb upstream 4063 true Chr11: 9186950-9191012 Eucalyptus grandis
Eucgr.K00781 0.5kb upstream 0.5kb upstream 500 false Chr11: 9190513-9191012 Eucalyptus grandis
Eucgr.K00781 0.5kb downstream 0.5kb downstream 4063 true Chr11: 9186450-9190512 Eucalyptus grandis
Eucgr.K00781 0.5kb downstream 0.5kb downstream 500 false Chr11: 9186450-9186949 Eucalyptus grandis
Eucgr.K00781 1.0kb upstream 1.0kb upstream 4563 true Chr11: 9186950-9191512 Eucalyptus grandis
Eucgr.K00781 1.0kb upstream 1.0kb upstream 1000 false Chr11: 9190513-9191512 Eucalyptus grandis
Eucgr.K00781 1.0kb downstream 1.0kb downstream 4563 true Chr11: 9185950-9190512 Eucalyptus grandis
Eucgr.K00781 1.0kb downstream 1.0kb downstream 1000 false Chr11: 9185950-9186949 Eucalyptus grandis
Eucgr.K00781 2.0kb upstream 2.0kb upstream 5563 true Chr11: 9186950-9192512 Eucalyptus grandis
Eucgr.K00781 2.0kb upstream 2.0kb upstream 2000 false Chr11: 9190513-9192512 Eucalyptus grandis
Eucgr.K00781 2.0kb downstream 2.0kb downstream 5563 true Chr11: 9184950-9190512 Eucalyptus grandis
Eucgr.K00781 2.0kb downstream 2.0kb downstream 2000 false Chr11: 9184950-9186949 Eucalyptus grandis
Eucgr.K00781 5.0kb upstream 5.0kb upstream 8563 true Chr11: 9186950-9195512 Eucalyptus grandis
Eucgr.K00781 5.0kb upstream 5.0kb upstream 5000 false Chr11: 9190513-9195512 Eucalyptus grandis
Eucgr.K00781 5.0kb downstream 5.0kb downstream 8563 true Chr11: 9181950-9190512 Eucalyptus grandis
Eucgr.K00781 5.0kb downstream 5.0kb downstream 5000 false Chr11: 9181950-9186949 Eucalyptus grandis
Eucgr.K00781 10.0kb upstream 10.0kb upstream 13563 true Chr11: 9186950-9200512 Eucalyptus grandis
Eucgr.K00781 10.0kb upstream 10.0kb upstream 10000 false Chr11: 9190513-9200512 Eucalyptus grandis
Eucgr.K00781 10.0kb downstream 10.0kb downstream 13563 true Chr11: 9176950-9190512 Eucalyptus grandis
Eucgr.K00781 10.0kb downstream 10.0kb downstream 10000 false Chr11: 9176950-9186949 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073618 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.21249 0.0 3.4409    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.11395 0.0 3.18709    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.44189 0.0 1.41404 Low Low

0 Strain