Gene : Eucgr.K00731 E. grandis v2.0
Defline:  (1 of 1) PTHR30372 - LIPID-A-DISACCHARIDE SYNTHASE Genomic Order:  613
Name:  ? Eucgr.K00731 Secondary Identifier:  ? PAC:32067832
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis NAGLIPASYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00731 0.5kb upstream 0.5kb upstream 4604 true Chr11: 8721654-8726257 Eucalyptus grandis
Eucgr.K00731 0.5kb upstream 0.5kb upstream 500 false Chr11: 8725758-8726257 Eucalyptus grandis
Eucgr.K00731 0.5kb downstream 0.5kb downstream 4604 true Chr11: 8721154-8725757 Eucalyptus grandis
Eucgr.K00731 0.5kb downstream 0.5kb downstream 500 false Chr11: 8721154-8721653 Eucalyptus grandis
Eucgr.K00731 1.0kb upstream 1.0kb upstream 5104 true Chr11: 8721654-8726757 Eucalyptus grandis
Eucgr.K00731 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8725758-8726757 Eucalyptus grandis
Eucgr.K00731 1.0kb downstream 1.0kb downstream 5104 true Chr11: 8720654-8725757 Eucalyptus grandis
Eucgr.K00731 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8720654-8721653 Eucalyptus grandis
Eucgr.K00731 2.0kb upstream 2.0kb upstream 6104 true Chr11: 8721654-8727757 Eucalyptus grandis
Eucgr.K00731 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8725758-8727757 Eucalyptus grandis
Eucgr.K00731 2.0kb downstream 2.0kb downstream 6104 true Chr11: 8719654-8725757 Eucalyptus grandis
Eucgr.K00731 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8719654-8721653 Eucalyptus grandis
Eucgr.K00731 5.0kb upstream 5.0kb upstream 9104 true Chr11: 8721654-8730757 Eucalyptus grandis
Eucgr.K00731 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8725758-8730757 Eucalyptus grandis
Eucgr.K00731 5.0kb downstream 5.0kb downstream 9104 true Chr11: 8716654-8725757 Eucalyptus grandis
Eucgr.K00731 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8716654-8721653 Eucalyptus grandis
Eucgr.K00731 10.0kb upstream 10.0kb upstream 14104 true Chr11: 8721654-8735757 Eucalyptus grandis
Eucgr.K00731 10.0kb upstream 10.0kb upstream 10000 false Chr11: 8725758-8735757 Eucalyptus grandis
Eucgr.K00731 10.0kb downstream 10.0kb downstream 14104 true Chr11: 8711654-8725757 Eucalyptus grandis
Eucgr.K00731 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8711654-8721653 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067392 5270 Rosid View MSA
123747166 5271 Pentapetalae View MSA
122791278 5272 Eudicot View MSA
122042549 5273 Angiosperm View MSA
121345953 5274 Embryophyte View MSA
123380297 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.63127 0.0 11.3199    
cufflinks 2.71355 0.0 6.97212    
cufflinks 5.67166 0.0 13.538    
cufflinks 2.49637 0.0 6.43753    
cufflinks 9.35843 0.0 21.4333   High
cufflinks 1.46849 0.0 4.03496   Low

0 Strain