Gene : Eucgr.K00728 E. grandis v2.0
Defline:  (1 of 2) PTHR11712:SF275 - 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE, MITOCHONDRIAL Genomic Order:  610
Name:  ? Eucgr.K00728 Secondary Identifier:  ? PAC:32066180
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis FASYN-ELONG-PWY Eucalyptus grandis pathologic  
Egrandis PWY-5156 Eucalyptus grandis pathologic  
Egrandis PWY-5971 Eucalyptus grandis pathologic  
Egrandis PWY-5989 Eucalyptus grandis pathologic  
Egrandis PWY-6282 Eucalyptus grandis pathologic  
Egrandis PWY-7388 Eucalyptus grandis pathologic  
Egrandis PWY-7663 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K00728 0.5kb upstream 0.5kb upstream 5370 true Chr11: 8674649-8680018 Eucalyptus grandis
Eucgr.K00728 0.5kb upstream 0.5kb upstream 500 false Chr11: 8679519-8680018 Eucalyptus grandis
Eucgr.K00728 0.5kb downstream 0.5kb downstream 5370 true Chr11: 8674149-8679518 Eucalyptus grandis
Eucgr.K00728 0.5kb downstream 0.5kb downstream 500 false Chr11: 8674149-8674648 Eucalyptus grandis
Eucgr.K00728 1.0kb upstream 1.0kb upstream 5870 true Chr11: 8674649-8680518 Eucalyptus grandis
Eucgr.K00728 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8679519-8680518 Eucalyptus grandis
Eucgr.K00728 1.0kb downstream 1.0kb downstream 5870 true Chr11: 8673649-8679518 Eucalyptus grandis
Eucgr.K00728 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8673649-8674648 Eucalyptus grandis
Eucgr.K00728 2.0kb upstream 2.0kb upstream 6870 true Chr11: 8674649-8681518 Eucalyptus grandis
Eucgr.K00728 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8679519-8681518 Eucalyptus grandis
Eucgr.K00728 2.0kb downstream 2.0kb downstream 6870 true Chr11: 8672649-8679518 Eucalyptus grandis
Eucgr.K00728 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8672649-8674648 Eucalyptus grandis
Eucgr.K00728 5.0kb upstream 5.0kb upstream 9870 true Chr11: 8674649-8684518 Eucalyptus grandis
Eucgr.K00728 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8679519-8684518 Eucalyptus grandis
Eucgr.K00728 5.0kb downstream 5.0kb downstream 9870 true Chr11: 8669649-8679518 Eucalyptus grandis
Eucgr.K00728 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8669649-8674648 Eucalyptus grandis
Eucgr.K00728 10.0kb upstream 10.0kb upstream 14870 true Chr11: 8674649-8689518 Eucalyptus grandis
Eucgr.K00728 10.0kb upstream 10.0kb upstream 10000 false Chr11: 8679519-8689518 Eucalyptus grandis
Eucgr.K00728 10.0kb downstream 10.0kb downstream 14870 true Chr11: 8664649-8679518 Eucalyptus grandis
Eucgr.K00728 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8664649-8674648 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060523 5270 Rosid View MSA
123738041 5271 Pentapetalae View MSA
122786623 5272 Eudicot View MSA
122051170 5273 Angiosperm View MSA
121345587 5274 Embryophyte View MSA
123424058 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.95577 0.0 13.9654    
cufflinks 2.05774 0.0 5.75405   Low
cufflinks 4.61888 0.0 11.6718    
cufflinks 4.50449 0.0 11.1394    
cufflinks 4.41021 0.0 10.9955    
cufflinks 8.71912 0.0 24.3097   High

0 Strain